LOADING...
   O00462;CH1624A
Protein Sequence Comparative Analysis   (PSCA)
 
  Back to Target List
 
O00462    CH1624A            JCSG 400587 Proposed Target 09-JAN-06

Protein Sequence Information


TOPSAN
JCSG Internal annotations

ACCESSIONO00462
DESCRIPTIONO00462
ORGANISMHOMO SAPIENS
COMMENT 
DR UNIPROT;
DR SPTR;
DR GenBank;
DR FFAS; 400587; Fold and function assignment.
DR TVPC; O00462; Homologs in PDB, JCSG and SG center.
DR OVP; CH1624A; Ortholog view popup.
DR TPM; O00462; Target PDB monitor.
DR FSS; O00462; Target function coverage.
PROPERTY Residues: 879 aa
Molecule Weight: 100920.15 Dalton
Isoelectric Point: 5.33
Extinction Coefficient: 211080
Gravy Index: -.23
Number of Met residues: 16
Percentage of Met residues: 1.82 %
Number of Cys residues: 17
Percentage of Cys residues: 1.93 %
SEQUENCE  amino acids 879 aa
>O00462  O00462
MRLHLLLLLALCGAGTTAAELSYSLRGNWSICNGNGSLELPGAVPGCVHSALFQQGLIQD
SYYRFNDLNYRWVSLDNWTYSKEFKIPFEISKWQKVNLILEGVDTVSKILFNEVTIGETD
NMFNRYSFDITNVVRDVNSIELRFQSAVLYAAQQSKAHTRYQVPPDCPPLVQKGECHVNF
VRKEQCSFSWDWGPSFPTQGIWKDVRIEAYNICHLNYFTFSPIYDKSAQEWNLEIESTFD
VVSSKPVGGQVIVAIPKLQTQQTYSIELQPGKRIVELFVNISKNITVETWWPHGHGNQTG
YNMTVLFELDGGLNIEKSAKVYFRTVELIEEPIKGSPGLSFYFKINGFPIFLKGSNWIPA
DSFQDRVTSELLRLLLQSVVDANMNTLRVWGGGIYEQDEFYELCDELGIMVWQDFMFACA
LYPTDQGFLDSVTAEVAYQIKRLKSHPSIIIWSGNNENEEALMMNWYHISFTDRPIYIKD
YVTLYVKNIRELVLAGDKSRPFITSSPTNGAETVAEAWVSQNPNSNYFGDVHFYDYISDC
WNWKVFPKARFASEYGYQSWPSFSTLEKVSSTEDWSFNSKFSLHRQHHEGGNKQMLYQAG
LHFKLPQSTDPLRTFKDTIYLTQVMQAQCVKTETEFYRRSRSEIVDQQGHTMGALYWQLN
DIWQAPSWASLEYGGKWKMLHYFAQNFFAPLLPVGFENENMFYIYGVSDLHSDYSMTLSV
RVHTWSSLEPVCSRVTERFVMKGGEAVCLYEEPVSELLRRCGNCTRESCVVSFYLSADHE
LLSPTNYHFLSSPKEAVGLCKAQITAIISQQGDIFVFDLETSAVAPFVWLDVGSIPGRFS
DNGFLMTEKTRTILFYPWEPTSKNELEQSFHVTSLTDIY

CDS  cDNA 2640 bp
   1 atgcgcctcc acctgctcct gctgctcgcg ctgtgcggtg caggcaccac cgccgcggag    60
  61 ctcagttaca gcttgcgtgg caactggagc atctgcaatg ggaacggctc gctggagctg   120
 121 cccggggcgg tccctggctg cgtgcacagc gccttgttcc agcagggcct gatccaggat   180
 181 tcttactaca gatttaatga ccttaactac agatgggtct ctttggataa ctggacctat   240
 241 agcaaagaat ttaaaatccc ctttgaaatt agcaaatggc aaaaagtaaa tttgattctt   300
 301 gagggagtgg atacggtttc aaaaatcctg ttcaatgaag tcactattgg ggaaacagac   360
 361 aatatgttca atagatatag ctttgatatt accaacgtgg tcagggacgt gaactccatt   420
 421 gagctgcgtt tccagtcagc ggtgttgtat gcagcacagc agagcaaagc tcacactcgc   480
 481 taccaggttc ccccagactg ccctccactt gtgcagaagg gtgaatgcca tgtcaacttt   540
 541 gttcggaagg agcaatgttc ctttagttgg gactgggggc cttcctttcc tacccaggga   600
 601 atctggaaag atgttagaat tgaagcctat aatatttgtc acctgaacta cttcacattt   660
 661 tccccaatat atgataagag tgcccaggag tggaatctgg aaatagagtc tacatttgat   720
 721 gttgtcagct caaagccagt tggtggtcaa gtgatcgtag ccatccctaa gttgcaaaca   780
 781 caacagacat acagcattga acttcaacct gggaaaagga ttgttgagct atttgtgaac   840
 841 attagcaaga atattactgt agaaacttgg tggcctcatg gacatggaaa ccagactggg   900
 901 tacaacatga ctgttctttt tgaactggat ggaggcttaa atattgaaaa atcagctaag   960
 961 gtttatttta ggacagtgga acttatagaa gagcctataa aagggtctcc tggtttgagt  1020
1021 ttctatttca aaattaatgg atttcccata tttctaaaag gctcaaactg gatcccagca  1080
1081 gattcattcc aggaccgagt aacctctgag ttgttacggc tccttttaca gtctgttgtg  1140
1141 gatgctaata tgaatactct tcgggtttgg ggaggaggaa tttatgagca ggatgaattc  1200
1201 tatgaactct gtgatgaact aggaataatg gtatggcagg attttatgtt tgcctgtgcc  1260
1261 ctttatccaa ctgatcaggg cttcctggat tcagtgacag cagaagttgc ctaccagatc  1320
1321 aagagactga aatctcatcc ttctatcatc atatggagtg gcaataatga aaatgaggag  1380
1381 gcgctgatga tgaattggta tcatatcagt ttcactgacc ggccaatcta catcaaggac  1440
1441 tatgtgacac tctatgtgaa aaacatcaga gagctcgtac tggcaggaga caagagtcgt  1500
1501 ccttttatta cgtccagtcc tacaaatggg gctgaaactg ttgcagaagc ctgggtctct  1560
1561 caaaacccta atagcaatta ttttggtgat gtacattttt atgactatat cagtgattgc  1620
1621 tggaactgga aagttttccc aaaagctcga tttgcatctg aatatggata tcagtcctgg  1680
1681 ccgtccttca gtacattaga aaaggtctcg tctacagagg actggtcttt caatagcaag  1740
1741 ttttcacttc atcgacaaca tcacgaaggt ggtaacaaac aaatgcttta tcaggctgga  1800
1801 cttcatttca aactccccca aagcacagat ccattacgca catttaaaga taccatctac  1860
1861 cttactcagg tgatgcaggc ccagtgtgtc aaaacagaaa ctgaattcta ccgccgtagt  1920
1921 cgcagcgaga tagtggatca gcaagggcac acgatggggg cactttattg gcagttgaat  1980
1981 gacatctggc aagctccttc ctgggcttct cttgagtacg gaggaaagtg gaaaatgctt  2040
2041 cattactttg ctcagaattt ctttgctcca ctgttgccag taggctttga gaatgaaaac  2100
2101 atgttctata tctatggtgt gtcagatctt cactcggatt attcgatgac actcagtgtg  2160
2161 agagtccata catggagctc cctggagccc gtgtgctctc gtgtgactga acgttttgtg  2220
2221 atgaaaggag gagaggctgt ctgcctttat gaggagccag tgtctgaatt gctgaggaga  2280
2281 tgtgggaatt gcacacggga aagctgtgtg gtttcctttt acctttcagc tgaccatgaa  2340
2341 ctcctgagcc cgaccaacta ccacttcctg tcctcaccga aggaggccgt ggggctctgc  2400
2401 aaggcgcaga tcactgccat catctctcag caaggtgaca tatttgtttt tgacctggag  2460
2461 acctcagctg tcgctccctt tgtttggttg gatgtaggaa gcatcccagg gagatttagt  2520
2521 gacaatggtt tcctcatgac tgagaagaca cgaactatat tattttaccc ttgggagccc  2580
2581 accagcaaga atgagttgga gcaatctttt catgtgacct ccttaacaga tatttactga  2640
Target constructs
Download sequence in PIR or FASTA format
Chemical properties of sequence with tag

Notes

The start codon is a ATG/Methionine in most of sequences, but the GTG/V, TTG/L, CTG/I can be the start codons in some cases as expressing in E.coli. The start codon warning is labelled by RED color in sequence(sample: 10174951).

Protein sequence information contains the annotation contents from both of JCSG and SWISS-PROT. The SWISS-PROT/TrEMBL annotation is accessed from SWALL(SPTR) on the EBI SRS server. PDB homologes show both identical and highly similar proteins with released date and protein function.


Contact Webmaster JCSG Menu