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TM0005;TM0005 |
Protein Sequence Comparative Analysis (PSCA) | |
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TM0005 TM0005 JCSG 281886 Protein Purification 04-FEB-02 Protein Sequence Information 
TOPSAN
JCSG Internal annotations
SEQUENCE amino acids 650 aa >TM0005 TM0005 DNA helicase, putative MTVQQFIKKLVRLVELERNAEINAMLDEMKRLSGEEREKKGRAVLGLTGKFIGEELGYFL VRFGRRKKIDTEIGVGDLVLISKGNPLKSDYTGTVVEKGERFITVAVDRLPSWKLKNVRI DLFASDITFRRQIENLMTLSSEGKKALEFLLGKRKPEESFEEEFTPFDEGLNESQREAVS LALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVTAESNLAVDNLVERLWGKVSL VRIGHPSRVSSHLKESTLAHQIETSSEYEKVKKMKEELAKLIKKRDSFTKPSPQWRRGLS DKKILEYAEKNWSARGVSKEKIKEMAEWIKLNSQIQDIRDLIERKEEIIASRIVREAQVV LSTNSSAALEILSGIVFDVVVVDEASQATIPSILIPISKGKKFVLAGDHKQLPPTILSED AKDLSRTLFEELITRYPEKSSLLDTQYRMNELLMEFPSEEFYDGKLKAAEKVRNITLFDL GVEIPNFGKFWDVVLSPKNVLVFIDTKNRSDRFERQRKDSPSRENPLEAQIVKEVVEKLL SMGVKEDWIGIITPYDDQVNLIRELIEAKVEVHSVDGFQGREKEVIIISFVRSNKNGEIG FLEDLRRLNVSLTRAKRKLIATGDSSTLSVHPTYRRFVEFVKKKGTYVIF CDS cDNA 1950 bp 1 atgacggttc agcagttcat aaagaagctt gtgaggctcg tagagctcga aaggaacgcg 60 61 gaaataaacg caatgctcga tgagatgaag cggctctcgg gggaggaaag agagaaaaag 120 121 ggtcgtgccg ttctgggtct cacaggaaaa tttataggag aagaacttgg atatttcctt 180 181 gtgaggtttg gaagaagaaa gaagatagac acagaaatcg gtgtgggtga tcttgttctc 240 241 ataagcaaag gaaaccccct caagagtgat tacacgggaa cggttgtgga gaaaggagag 300 301 cgtttcatca cggtagcggt cgataggctt ccatcgtgga agctcaaaaa tgtgaggata 360 361 gacctctttg cgagcgacat cacgttcaga agacagatag agaacctgat gacgctttct 420 421 tcggaaggga aaaaagctct tgagtttcta cttggaaaga ggaagccaga agagtcgttt 480 481 gaagaagagt tcactccctt cgatgaagga ttgaacgaga gtcagaggga agcggtttcc 540 541 cttgccctcg gaagttctga tttctttctc atacacggcc ccttcggcac gggaaagacc 600 601 agaacactcg tggagtacat aagacaggaa gtagcacgtg gaaagaaaat tctggtcaca 660 661 gcggagagta accttgctgt ggacaacctc gtggagaggc tctgggggaa agtgtctctg 720 721 gtgagaattg gccatccttc gcgcgtgtcc tctcacctga aggagtccac actcgcacat 780 781 caaatcgaaa caagcagtga gtacgagaag gtaaagaaga tgaaggaaga actcgcaaag 840 841 ttgatcaaaa aaagggacag tttcacaaaa ccttcaccgc agtggagaag agggctcagc 900 901 gacaagaaga tcctggagta cgcagagaag aactggagtg ccaggggagt ttccaaggaa 960 961 aagataaagg agatggcaga gtggataaag ttaaacagcc agattcaaga tatcagggac 1020 1021 ctcatagaac gcaaagagga aataatagcg agcaggatag tacgggaagc gcaggttgtg 1080 1081 ctttcaacca attcgtccgc agctctggaa atactatcgg gaatagtctt cgatgtggta 1140 1141 gttgttgacg aggcctctca ggcaactatc ccaagcatcc tcattcccat atcgaaaggc 1200 1201 aaaaagttcg tcctcgctgg ggatcacaaa cagcttccac ccacgatact ctcagaagac 1260 1261 gcgaaggatc tttcgagaac actgtttgaa gaactcataa ctcgatatcc cgagaagtct 1320 1321 tctcttctcg atacccagta cagaatgaac gaacttttga tggagtttcc gagtgaagaa 1380 1381 ttttacgacg gaaaactgaa agcggccgag aaagtcagaa acataacgct cttcgacctt 1440 1441 ggagtggaga taccgaactt tggaaagttc tgggatgttg ttctctcccc aaaaaacgtt 1500 1501 ctggtcttca tagacacaaa gaacagatct gacagatttg aaaggcaaag gaaagactct 1560 1561 ccctcgagag agaatccatt agaagcacag atcgtgaaag aggttgtgga aaagcttctc 1620 1621 tccatggggg tgaaggagga ttggatcggg atcatcactc cctacgatga tcaggtgaat 1680 1681 ctcataagag agttgatcga agcgaaagta gaagtacaca gtgtggatgg ttttcaggga 1740 1741 agggaaaaag aggtcatcat catctcattt gtgcgttcga acaaaaacgg tgaaataggg 1800 1801 ttcctcgaag atctgagaag actcaacgtc tcactcacac gggcgaaaag aaaactgata 1860 1861 gcaacgggag attcgagcac gctctctgtc catccaactt acagaagatt tgtagagttt 1920 1921 gtgaaaaaga agggaactta cgtgatcttt 1950Target constructs Download sequence in PIR or FASTA format Chemical properties of sequence with tag
Notes The start codon is a ATG/Methionine in most of sequences, but the GTG/V, TTG/L, CTG/I can be the start codons in some cases as expressing in E.coli. The start codon warning is labelled by RED color in sequence(sample: 10174951). Protein sequence information contains the annotation contents from both of JCSG and SWISS-PROT. The SWISS-PROT/TrEMBL annotation is accessed from SWALL(SPTR) on the EBI SRS server. PDB homologes show both identical and highly similar proteins with released date and protein function. |
