In case of co-crystallized proteins each member of the complex is listed separately
|
History |
TOPSAN |
PDB ID |
Method |
|
Deposition Date |
Accession Number |
|
 |
|
 |
Target ID |
|
Target Name |
|
Local Accession |
|
Description |
click picture for more info |
| 1 |
 |
 |
1vp2 |
X-RAY |
|
2004/10/06 |
TM0159 |
|
 |
|
 |
282039 |
|
TM0159 |
|
TM0159 |
|
Putative Xanthosine triphosphate pyrophosphatase (EC 3.6.1.-)/HAM1 protein homolog. |
 |
| 2 |
 |
 |
2qtp |
X-RAY |
|
2007/08/02 |
YP_166079.1 |
|
N/A |
|
 |
374584 |
|
PJ06684A |
|
PJ06684A |
|
gi|56695728|ref|YP_166079.1| hypothetical protein SPO0826 [Silicibacter pomeroyi DSS-3] |
 |
| 3 |
 |
 |
2pc1 |
X-RAY |
|
2007/03/29 |
NP_688560.1 |
|
N/A |
|
 |
371586 |
|
FK9742A |
|
FK9742A |
|
|
 |
| 4 |
 |
 |
3e10 |
X-RAY |
|
2008/08/01 |
NP_348178.1 |
|
N/A |
|
 |
390674 |
|
MG0383C |
|
MG0383C |
|
gi|15894829|ref|NP_348178.1| Nitroreductase family protein [Clostridium acetobutylicum] |
 |
| 5 |
 |
 |
3bgu |
X-RAY |
|
2007/11/27 |
YP_288824.1 |
|
 |
|
 |
378307 |
|
FM11991A |
|
FM11991A |
|
Dimeric ferredoxin-like protein of unknown function. |
 |
| 6 |
 |
 |
1vmg |
X-RAY |
|
2004/09/24 |
13816655 |
|
 |
|
 |
358109 |
|
13816655 |
|
TB0913Q |
|
Hypothetical protein SSO12199. |
 |
| 7 |
 |
 |
1zkg |
X-RAY |
|
2005/05/02 |
TM1030 |
|
 |
|
 |
282897 |
|
TM1030 |
|
TM1030 |
|
Transcriptional regulator, TETR family. |
 |
| 8 |
 |
 |
2afb |
X-RAY |
|
2005/07/25 |
TM0067 |
|
N/A |
|
 |
281948 |
|
TM0067 |
|
TM0067 |
|
2-dehydro-3- deoxygluconokinase (EC 2.7.1.45) |
 |
| 9 |
 |
 |
1vmh |
X-RAY |
|
2004/09/24 |
15023806 |
|
 |
|
 |
357074 |
|
15023806 |
|
TB0723K |
|
Uncharacterized conserved protein YjbQ/UPF0047 family, ortholog
yugU B.subtilis. |
 |
| 10 |
 |
 |
3ce9 |
X-RAY |
|
2008/02/28 |
NP_348253.1 |
|
N/A |
|
 |
379134 |
|
FN0285A |
|
FN0285A |
|
Glycerol dehydrogenase. |
 |
| 11 |
 |
 |
2ess |
X-RAY |
|
2005/10/26 |
BT2075 |
|
N/A |
|
 |
359110 |
|
BT2075 |
|
CL5916A |
|
|
 |
| 12 |
 |
 |
1vky |
X-RAY |
|
2004/06/28 |
TM0574 |
|
 |
|
 |
282447 |
|
TM0574 |
|
TM0574 |
|
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
(Queuosine biosynthesis protein queA). |
 |
| 13 |
 |
 |
2od5 |
X-RAY |
|
2006/12/21 |
JCVI_PEP_1096688149193 |
|
N/A |
|
 |
367491 |
|
GN7747A |
|
GN7747A |
|
|
 |
| 14 |
 |
 |
2gfg |
X-RAY |
|
2006/03/21 |
10175472 |
|
N/A |
|
 |
359067 |
|
10175472 |
|
CL5885A |
|
|
 |
| 15 |
 |
 |
2i51 |
X-RAY |
|
2006/08/23 |
NPUN_22DEC03_CONTIG1_REVISED_GENENPF5749 |
|
N/A |
|
 |
367231 |
|
FH7484A |
|
FH7484A |
|
|
 |
| 16 |
 |
 |
3dxq |
X-RAY |
|
2008/07/24 |
NP_106042.1 |
|
N/A |
|
 |
386994 |
|
EK14125A |
|
EK14125A |
|
Putative choline/ethanolamine/thiamine kinase. |
 |
| 17 |
 |
 |
3ddd |
X-RAY |
|
2008/06/05 |
NP_142035.1 |
|
N/A |
|
 |
379751 |
|
FN12657A |
|
FN12657A |
|
gi|14589974|ref|NP_142035.1| hypothetical protein [Pyrococcus horikoshii] |
 |
| 18 |
 |
 |
3bos |
X-RAY |
|
2007/12/17 |
SAMA_14OCT04_CONTIG53_REVISED_GENE1514 |
|
N/A |
|
 |
378832 |
|
NT12250A |
|
NT12250A |
|
Putative DNA replication regulator Hda is likely to be a CTPase. |
 |
| 19 |
 |
 |
2gno |
X-RAY |
|
2006/04/10 |
TM0771 |
|
N/A |
|
 |
360384 |
|
TM0771 |
|
TM0771 |
|
DNA polymerase III, gamma subunit-related protein. |
 |
| 20 |
 |
 |
1vl0 |
X-RAY |
|
2004/06/30 |
15025322 |
|
 |
|
 |
355809 |
|
15025322 |
|
15025322 |
|
DTDP-4-dehydrorhamnose reductase, rfbD ortholog. |
 |
| 21 |
 |
 |
3bdi |
X-RAY |
|
2007/11/14 |
NP_393672.1 |
|
N/A |
|
 |
388819 |
|
FL4049A |
|
FL4049A |
|
Predicted CIB-like hydrolase (alpha/beta superfamily) from Thermoplasma acidophilum is similar to human CCG1/TAFII250-interacting factor B (CIB). The predicted catalytic residues are: Asp157, His185 and Ser107. The conserved genomic neighbour of this protein (NP_393672.1) is a predicted metal-dependent phosphohydrolase (NP_393671.1). |
 |
| 22 |
 |
 |
2oyo |
X-RAY |
|
2007/02/22 |
YP_604910.1 |
|
N/A |
|
 |
371529 |
|
FK5490E |
|
FK5490E |
|
|
 |
| 23 |
 |
 |
1vr3 |
X-RAY |
|
2005/01/28 |
13543033 |
|
 |
|
 |
354741 |
|
13543033 |
|
MM4387A |
|
Acireductone dioxygenase |
 |
| 24 |
 |
 |
1vli |
X-RAY |
|
2004/07/27 |
2636322 |
|
 |
|
 |
355716 |
|
2636322 |
|
MB3402A |
|
Spore coat polysaccharide biosynthesis protein spsE. |
 |
| 25 |
 |
 |
2prr |
X-RAY |
|
2007/05/04 |
YP_296737.1 |
|
N/A |
|
 |
370263 |
|
FJ5490C |
|
FJ5490C |
|
|
 |
| 26 |
 |
 |
1vp7 |
X-RAY |
|
2004/10/14 |
NP_881400.1 |
|
 |
|
 |
356938 |
|
33563829 |
|
TB1769D |
|
Exodeoxyribonuclease VII small subunit (EC 3.1.11.6). |
 |
| 27 |
 |
 |
1vl4 |
X-RAY |
|
2004/07/09 |
TM0727 |
|
 |
|
 |
282597 |
|
TM0727 |
|
TM0727 |
|
PmbA protein |
 |
| 28 |
 |
 |
3cc8 |
X-RAY |
|
2008/02/25 |
NP_977653.1 |
|
N/A |
|
 |
383436 |
|
FP4030W |
|
FP4030W |
|
Putative methyltransferase from NDP-N-methyl-L-glucosamine biosynthetic pathway. |
 |
| 29 |
 |
 |
2qtd |
X-RAY |
|
2007/08/01 |
NP_247299.1 |
|
N/A |
|
 |
376479 |
|
FL11227A |
|
FL11227A |
|
gi|15668501|ref|NP_247299.1| M. jannaschii predicted coding region MJ0327 [Methanococcus jannaschii] |
 |
| 30 |
 |
 |
2r1i |
X-RAY |
|
2007/08/22 |
ARTH_26JUL04_CONTIG35_REVISED_GENE1183 |
|
N/A |
|
 |
376331 |
|
FL11080A |
|
FL11080A |
|
arth_26jul04_Contig35_revised_gene1183 |
 |
| 31 |
 |
 |
1o22 |
X-RAY |
|
2003/02/15 |
TM0875 |
|
 |
|
 |
282744 |
|
TM0875 |
|
TM0875 |
|
Hypothetical protein TM0875. |
 |
| 32 |
 |
 |
2gc9 |
X-RAY |
|
2006/03/13 |
NP_786857.1 |
|
N/A |
|
 |
360800 |
|
PC05870A |
|
PC05870A |
|
|
 |
| 33 |
|
 |
3dka |
X-RAY |
|
2008/06/24 |
NP_389123.1 |
|
CASP Target |
|
CASP Target |
389728 |
|
PK14417A |
|
PK14417A |
|
CASP Target |
 |
| 34 |
 |
 |
1vl8 |
X-RAY |
|
2004/07/14 |
TM0441 |
|
 |
|
 |
359776 |
|
TM0441 |
|
TM0441 |
|
Gluconate 5-dehydrogenase (EC 1.1.1.69) |
 |
| 35 |
 |
 |
2ftz |
X-RAY |
|
2006/01/25 |
TM0161 |
|
N/A |
|
 |
282041 |
|
TM0161 |
|
TM0161 |
|
Geranyltranstransferase (EC 2.5.1.10) |
 |
| 36 |
 |
 |
2qea |
X-RAY |
|
2007/06/25 |
YP_508897.1 |
|
N/A |
|
 |
375040 |
|
FB7482B |
|
FB7482B |
|
jann_22dec04_Contig27_revised_gene3847 |
 |
| 37 |
 |
 |
2gnr |
X-RAY |
|
2006/04/10 |
13815350 |
|
N/A |
|
 |
361217 |
|
PC01796D |
|
PC01796D |
|
|
 |
| 38 |
 |
 |
3csw |
X-RAY |
|
2008/04/10 |
TM0831 |
|
N/A |
|
 |
282701 |
|
TM0831 |
|
TM0831 |
|
Probable branched-chain amino acid aminotransferase (EC 2.6.1.42)
(BCAT). |
 |
| 39 |
 |
 |
2ozj |
X-RAY |
|
2007/02/26 |
YP_518966.1 |
|
N/A |
|
 |
366882 |
|
FG7303A |
|
FG7303A |
|
|
 |
| 40 |
 |
 |
2qjv |
X-RAY |
|
2007/07/09 |
16422983 |
|
N/A |
|
 |
373908 |
|
PC06845C |
|
PC06845C |
|
PC06845C |
 |
| 41 |
 |
 |
2obn |
X-RAY |
|
2006/12/19 |
YP_324013.1 |
|
N/A |
|
 |
370701 |
|
PC07755A |
|
PC07755A |
|
|
 |
| 42 |
 |
 |
2r9v |
X-RAY |
|
2007/09/13 |
TM1612 |
|
N/A |
|
 |
283469 |
|
TM1612 |
|
TM1612 |
|
ATP synthase alpha chain (EC 3.6.3.14) |
 |
| 43 |
 |
 |
2itb |
X-RAY |
|
2006/10/19 |
NP_744337.1 |
|
N/A |
|
 |
360824 |
|
PC06175E |
|
PC06175E |
|
|
 |
| 44 |
 |
 |
3bby |
X-RAY |
|
2007/11/11 |
NP_416804.1 |
|
N/A |
|
 |
379351 |
|
FN12316A |
|
FN12316A |
|
Glutathione S-transferase. |
 |
| 45 |
 |
 |
1vlr |
X-RAY |
|
2004/08/10 |
16740816 |
|
 |
|
 |
354778 |
|
16740816 |
|
16740816 |
|
1700001E16Rik protein (RIKEN cDNA 1700001E16 gene) (Histidine triad
protein member 5). |
 |
| 46 |
 |
 |
1vlh |
X-RAY |
|
2004/07/23 |
TM0741 |
|
 |
|
 |
359843 |
|
TM0741 |
|
TM0741 |
|
Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Pantetheine-
phosphate adenylyltransferase) (PPAT) (Dephospho-CoA
pyrophosphorylase). |
 |
| 47 |
 |
 |
2ra9 |
X-RAY |
|
2007/09/14 |
YP_001050848.1 |
|
N/A |
|
 |
380281 |
|
PC06938B |
|
PC06938B |
|
PC06938B |
 |
| 48 |
 |
 |
1vqu |
X-RAY |
|
2005/01/05 |
17130499 |
|
 |
|
 |
354074 |
|
17130499 |
|
17130499 |
|
Anthranilate phosphoribosyltransferase 2 (EC 2.4.2.18). |
 |
| 49 |
 |
 |
2go7 |
X-RAY |
|
2006/04/12 |
NP_346487.1 |
|
N/A |
|
 |
359637 |
|
NP_346487.1 |
|
CL5766A |
|
|
 |
| 50 |
 |
 |
3due |
X-RAY |
|
2008/07/17 |
YP_001300247.1 |
|
N/A |
|
 |
390185 |
|
GS13115A |
|
GS13115A |
|
GS13115A |
 |
| 51 |
 |
 |
2hq7 |
X-RAY |
|
2006/07/18 |
NP_350077.1 |
|
N/A |
|
 |
366858 |
|
FG7279A |
|
FG7279A |
|
|
 |
| 52 |
 |
 |
2fur |
X-RAY |
|
2006/01/27 |
10640715 |
|
N/A |
|
 |
359680 |
|
10640715 |
|
CL6252A |
|
|
 |
| 53 |
 |
 |
2q3l |
X-RAY |
|
2007/05/30 |
YP_001095227.1 |
|
N/A |
|
 |
372337 |
|
PG9822C |
|
PG9822C |
|
|
 |
| 54 |
 |
 |
3dde |
X-RAY |
|
2008/06/05 |
YP_564736.1 |
|
N/A |
|
 |
370140 |
|
FJ9110A |
|
FJ9110A |
|
|
 |
| 55 |
 |
 |
1vk9 |
X-RAY |
|
2004/05/06 |
TM1506 |
|
 |
|
 |
283363 |
|
TM1506 |
|
TM1506 |
|
Hypothetical protein TM1506. |
 |
| 56 |
 |
 |
1j5y |
X-RAY |
|
2002/07/05 |
TM1602 |
|
N/A |
|
 |
283459 |
|
TM1602 |
|
TM1602 |
|
Transcriptional regulator, biotin repressor family. |
 |
| 57 |
 |
 |
1vpb |
X-RAY |
|
2004/10/15 |
BT3649 |
|
 |
|
 |
356879 |
|
29340964 |
|
TB5115A |
|
Putative modulator of DNA gyrase. |
 |
| 58 |
 |
 |
3cu3 |
X-RAY |
|
2008/04/15 |
NPUN_22DEC03_CONTIG1_REVISED_GENENPR1993 |
|
N/A |
|
 |
377910 |
|
FM11613A |
|
FM11613A |
|
npun_22dec03_Contig1_revised_geneNpR1993 |
 |
| 59 |
 |
 |
3db2 |
X-RAY |
|
2008/05/30 |
DHAF_12NOV03_CONTIG1044_REVISED_GENE999 |
|
N/A |
|
 |
379259 |
|
FN12543A |
|
FN12543A |
|
Putative NADPH-dependent oxidoreductase. |
 |
| 60 |
 |
 |
2iiu |
X-RAY |
|
2006/09/28 |
NP_719307.1 |
|
N/A |
|
 |
366232 |
|
PD01865F |
|
PD01865F |
|
|
 |
| 61 |
 |
 |
1vjx |
X-RAY |
|
2004/04/01 |
TM1526 |
|
 |
|
 |
283383 |
|
TM1526 |
|
TM1526 |
|
Putative ferritin-like diiron-carboxylate protein |
 |
| 62 |
 |
 |
2p4g |
X-RAY |
|
2007/03/12 |
NP_939744.1 |
|
 |
|
 |
366862 |
|
FG7283A |
|
FG7283A |
|
|
 |
| 63 |
 |
 |
3by7 |
X-RAY |
|
2008/01/15 |
JCVI_PEP_1096686650277 |
|
N/A |
|
 |
380229 |
|
GN7729A |
|
GN7729A |
|
The Sm-like protein (ECX21941.1) sequence conservation is different than in structurally similar proteins. Its gene is observed in the neighborhood of genes encoding ribosomal protein S6 modification protein, ferredoxin, and DNA polymerase. |
 |
| 64 |
 |
 |
3db0 |
X-RAY |
|
2008/05/30 |
NP_472219.1 |
|
N/A |
|
 |
380201 |
|
FH7686A |
|
FH7686A |
|
FH7686A |
 |
| 65 |
 |
 |