In case of co-crystallized proteins each member of the complex is listed separately
|
History |
TOPSAN |
PDB ID |
Method |
|
Deposition Date |
Accession Number |
|
 |
|
 |
Target ID |
|
Target Name |
|
Local Accession |
|
Description |
click picture for more info |
| 1 |
 |
 |
3e99 |
X-RAY |
|
2008/08/21 |
YP_105014.1 |
|
N/A |
|
 |
390534 |
|
MG14458B |
|
MG14458B |
|
gi|53716528|ref|YP_105014.1| benzoate 1,2-dioxygenase beta subunit [Burkholderia mallei ATCC 23344] |
 |
| 2 |
 |
 |
3e98 |
X-RAY |
|
2008/08/21 |
NP_253966.1 |
|
N/A |
|
 |
381648 |
|
PU6302B |
|
PU6302B |
|
gi|15600472|ref|NP_253966.1| conserved hypothetical protein [Pseudomonas aeruginosa PA01] |
 |
| 3 |
 |
 |
3e97 |
X-RAY |
|
2008/08/21 |
DGEO_15APR04_CONTIG105_REVISED_GENE503 |
|
N/A |
|
 |
390750 |
|
MG10808B |
|
MG10808B |
|
Transcriptional regulator, Crp/Fnr family. |
 |
| 4 |
 |
 |
3e49 |
X-RAY |
|
2008/08/11 |
YP_556190.1 |
|
N/A |
|
 |
381357 |
|
PU6423E |
|
PU6423E |
|
gi|91780983|ref|YP_556190.1| hypothetical protein Bxe_C0966 [Burkholderia xenovorans LB400] |
 |
| 5 |
 |
 |
3e39 |
X-RAY |
|
2008/08/06 |
YP_387283.1 |
|
N/A |
|
 |
390745 |
|
MG0383I |
|
MG0383I |
|
gi|78355834|ref|YP_387283.1| nitroreductase family protein [Desulfovibrio desulfuricans G20] |
 |
| 6 |
 |
 |
3e38 |
X-RAY |
|
2008/08/06 |
YP_001300751.1 |
|
N/A |
|
 |
390183 |
|
GS12090A |
|
GS12090A |
|
two-domain protein containing predicted PHP-like metal-dependent phosphoesterase |
 |
| 7 |
 |
 |
3e11 |
X-RAY |
|
2008/08/01 |
YP_873820.1 |
|
N/A |
|
 |
376525 |
|
PS06262 |
|
PS06262 |
|
Predicted zincin-like metalloprotease. |
 |
| 8 |
 |
 |
3e10 |
X-RAY |
|
2008/08/01 |
NP_348178.1 |
|
N/A |
|
 |
390674 |
|
MG0383C |
|
MG0383C |
|
gi|15894829|ref|NP_348178.1| Nitroreductase family protein [Clostridium acetobutylicum] |
 |
| 9 |
 |
 |
3e8s |
X-RAY |
|
2008/08/20 |
NP_744700.1 |
|
N/A |
|
 |
381657 |
|
PU4030C |
|
PU4030C |
|
gi|26989275|ref|NP_744700.1| hypothetical protein PP2555 [Pseudomonas putida KT2440] |
 |
| 10 |
 |
 |
3e8o |
X-RAY |
|
2008/08/20 |
NP_295823.1 |
|
N/A |
|
 |
390777 |
|
MG14516A |
|
MG14516A |
|
Protein of unknown function with ferredoxin-like fold. |
 |
| 11 |
 |
 |
3e5d |
X-RAY |
|
2008/08/13 |
YP_013033.1 |
|
N/A |
|
 |
367570 |
|
NB7852A |
|
NB7852A |
|
|
 |
| 12 |
 |
 |
3e4v |
X-RAY |
|
2008/08/12 |
YP_544701.1 |
|
N/A |
|
 |
375043 |
|
FB10611C |
|
FB10611C |
|
gi|91774945|ref|YP_544701.1| hypothetical protein Mfla_0590 [Methylobacillus flagellatus KT] |
 |
| 13 |
 |
 |
3e02 |
X-RAY |
|
2008/07/30 |
YP_555544.1 |
|
N/A |
|
 |
381354 |
|
PU6423C |
|
PU6423C |
|
Protein of unknown function (DUF849). |
 |
| 14 |
 |
 |
3ff2 |
X-RAY |
|
2008/12/01 |
SARO_25NOV03_CONTIG26_REVISED_GENE949 |
|
N/A |
|
 |
391039 |
|
MG14602A |
|
MG14602A |
|
Uncharacterized cystatin fold protein (YP_497570.1) from NTF2 superfamily. It is similar to proteins from COG4538. |
 |
| 15 |
 |
 |
3ff0 |
X-RAY |
|
2008/12/01 |
NP_250591.1 |
|
N/A |
|
 |
391122 |
|
MG9813A |
|
MG9813A |
|
Protein PhzB2 with cystatin-like fold and unknown function in phenazine biosynthesis. |
 |
| 16 |
 |
 |
3fez |
X-RAY |
|
2008/12/01 |
YP_014836.1 |
|
N/A |
|
 |
390913 |
|
MG14572B |
|
MG14572B |
|
Uncharacterized ferrodoxin fold protein related to antibiotic biosynthesis monooxygenases. |
 |
| 17 |
 |
 |
3fdh |
X-RAY |
|
2008/11/25 |
NP_810946.1 |
|
N/A |
|
 |
393011 |
|
GS13599A |
|
GS13599A |
|
Outer membrane nutrient binding protein from SusD/RagB family. |
 |
| 18 |
 |
 |
3fdb |
X-RAY |
|
2008/11/25 |
NP_940074.1 |
|
N/A |
|
 |
390709 |
|
MG14491A |
|
MG14491A |
|
Putative PLP-dependent beta-cystathionase. |
 |
| 19 |
 |
 |
3fd0 |
X-RAY |
|
2008/11/24 |
NP_470671.1 |
|
N/A |
|
 |
390899 |
|
MG9652H |
|
MG9652H |
|
Putative cystathionine beta-lyase involved in aluminum resistance (Pfam06838/COG4100). |
 |
| 20 |
 |
 |
3fcr |
X-RAY |
|
2008/11/22 |
YP_614685.1 |
|
N/A |
|
 |
391382 |
|
MG14585B |
|
MG14585B |
|
Putative PLP-dependent aminotransferase. |
 |
| 21 |
 |
 |
3fcn |
X-RAY |
|
2008/11/21 |
YP_428290.1 |
|
N/A |
|
 |
383760 |
|
FP6436A |
|
FP6436A |
|
An alpha-helical protein of unknown function (Pfam01724). It is in genomic neighborhood of rnhB (Ribonuclease HII). |
 |
| 22 |
 |
 |
3fa5 |
X-RAY |
|
2008/11/14 |
YP_917261.1 |
|
N/A |
|
 |
378383 |
|
PT05853A |
|
PT05853A |
|
Protein of unknown function (DUF849). |
 |
| 23 |
 |
 |
3f9t |
X-RAY |
|
2008/11/14 |
NP_247014.1 |
|
N/A |
|
 |
390948 |
|
MG2021G |
|
MG2021G |
|
L-tyrosine decarboxylase MfnA (EC 4.1.1.25). |
 |
| 24 |
 |
 |
3f9s |
X-RAY |
|
2008/11/14 |
AFE_2539 |
|
N/A |
|
 |
391571 |
|
MG5552I |
|
MG5552I |
|
Putative polyketide cyclase. |
 |
| 25 |
 |
 |
3f8x |
X-RAY |
|
2008/11/13 |
YP_050331.1 |
|
N/A |
|
 |
390788 |
|
MG14518A |
|
MG14518A |
|
Putative delta-5-3-ketosteroid isomerase. |
 |
| 26 |
 |
 |
3f8h |
X-RAY |
|
2008/11/12 |
YP_611791.1 |
|
N/A |
|
 |
391384 |
|
MG14561D |
|
MG14561D |
|
Putative polyketide cyclase. Analysis of genomic neighborhood and phylogenetic profiles indicate that this protein may be functionally associated with nitrilases that break carbon-nitrogen bonds. |
 |
| 27 |
 |
 |
3f7x |
X-RAY |
|
2008/11/10 |
NP_743055.1 |
|
N/A |
|
 |
391191 |
|
MG14561C |
|
MG14561C |
|
Putative polyketide cyclase. |
 |
| 28 |
 |
 |
3f7w |
X-RAY |
|
2008/11/10 |
TFUS_04MAR05_CONTIG93_REVISED_GENE318 |
|
N/A |
|
 |
387095 |
|
EK2269L |
|
EK2269L |
|
tfus_04mar05_Contig93_revised_gene318 |
 |
| 29 |
 |
 |
3f7s |
X-RAY |
|
2008/11/10 |
NP_746665.1 |
|
N/A |
|
 |
391198 |
|
MG5690C |
|
MG5690C |
|
NTF2-like protein of unknown function. |
 |
| 30 |
 |
 |
3f7c |
X-RAY |
|
2008/11/07 |
YP_958225.1 |
|
N/A |
|
 |
394855 |
|
PS04222 |
|
PS04222 |
|
Protein of unknown function (DUF416). It is similar to yjaG from E. coli. |
 |
| 31 |
 |
 |
3f6t |
X-RAY |
|
2008/11/06 |
YP_194538.1 |
|
N/A |
|
 |
391714 |
|
MG11333F |
|
MG11333F |
|
Aspartate aminotransferase (E.C. 2.6.1.1). It is in the conserved genomic neighborhood of aspartate alanine antiporter. |
 |
| 32 |
 |
 |
3f44 |
X-RAY |
|
2008/10/31 |
YP_193413.1 |
|
N/A |
|
 |
391715 |
|
MG8150B |
|
MG8150B |
|
Putative monooxygenase. May be involved in phospholipid metabolism. |
 |
| 33 |
 |
 |
3f43 |
X-RAY |
|
2008/10/31 |
TM1081 |
|
N/A |
|
 |
282948 |
|
TM1081 |
|
TM1081 |
|
Putative anti-sigma factor antagonist TM1081. |
 |
| 34 |
 |
 |
3f40 |
X-RAY |
|
2008/10/31 |
YP_677363.1 |
|
N/A |
|
 |
390727 |
|
MG14501A |
|
MG14501A |
|
NTF2-like protein of unknown function. |
 |
| 35 |
 |
 |
3f1z |
X-RAY |
|
2008/10/28 |
YP_001337197.1 |
|
N/A |
|
 |
390051 |
|
GS13722A |
|
GS13722A |
|
Putative nucleic acid-binding lipoprotein. |
 |
| 36 |
 |
 |
3f14 |
X-RAY |
|
2008/10/27 |
YP_680363.1 |
|
N/A |
|
 |
390726 |
|
MG14500A |
|
MG14500A |
|
NTF2-like protein of unknown function. |
 |
| 37 |
 |
 |
3f0h |
X-RAY |
|
2008/10/24 |
RER070207000802 |
|
N/A |
|
 |
391588 |
|
MG1400B |
|
MG1400B |
|
REr070207000802 |
 |
| 38 |
 |
 |
3ezu |
X-RAY |
|
2008/10/23 |
NP_951600.1 |
|
N/A |
|
 |
390844 |
|
MG1588A |
|
MG1588A |
|
Multidomain protein of unknown function with GGDEF-domain. A wide range of signaling proteins contain a conserved helical segment. It is possible that two alpha helices (between ferritin-like domain and GGDEF-domain) are part of such conserved segment. |
 |
| 39 |
 |
 |
3ezs |
X-RAY |
|
2008/10/23 |
NP_207418.1 |
|
N/A |
|
 |
390859 |
|
MG14465B |
|
MG14465B |
|
Aminotransferase AspB. |
 |
| 40 |
 |
 |
3ez1 |
X-RAY |
|
2008/10/22 |
YP_604413.1 |
|
N/A |
|
 |
390749 |
|
MG14492C |
|
MG14492C |
|
Putative aminotransferase (MocR family). This protein may be functionally associated with bacterial regulatory proteins (GntR superfamily). |
 |
| 41 |
 |
 |
3ez0 |
X-RAY |
|
2008/10/22 |
YP_832262.1 |
|
N/A |
|
 |
376073 |
|
FL10716A |
|
FL10716A |
|
Protein of unknown function with ferritin-like fold. |
 |
| 42 |
 |
 |
3euc |
X-RAY |
|
2008/10/09 |
YP_297314.1 |
|
N/A |
|
 |
391227 |
|
MG14503Q |
|
MG14503Q |
|
Histidinol-phosphate aminotransferase. |
 |
| 43 |
 |
 |
3eua |
X-RAY |
|
2008/10/09 |
NP_391141.1 |
|
N/A |
|
 |
390575 |
|
MG10938A |
|
MG10938A |
|
Putative phosphosugar isomerase (COG2222) and hypothetical sugar kinase YurL have similar phylogenetic cooccurrence and are encoded by genes from the same genomic neighborhood. |
 |
| 44 |
 |
 |
3eu8 |
X-RAY |
|
2008/10/09 |
YP_210071.1 |
|
N/A |
|
 |
390129 |
|
GS13905B |
|
GS13905B |
|
Putative glucoamylase. |
 |
| 45 |
 |
 |
3etn |
X-RAY |
|
2008/10/08 |
YP_209877.1 |
|
N/A |
|
 |
391616 |
|
MG0829AS |
|
MG0829AS |
|
Putative phosphosugar isomerase. Similar to Leptospira interrogans polysialic acid capsule expression protein KpsF |
 |
| 46 |
 |
 |
3es4 |
X-RAY |
|
2008/10/03 |
17741406 |
|
N/A |
|
 |
390432 |
|
MG14524A |
|
MG14524A |
|
Protein of unknown function (DUF861) with a RmlC-like cupin fold. |
 |
| 47 |
 |
 |
3es1 |
X-RAY |
|
2008/10/03 |
YP_001165807.1 |
|
N/A |
|
 |
391033 |
|
MG9341A |
|
MG9341A |
|
Protein with a cupin-like fold and unknown function. |
 |
| 48 |
 |
 |
3er7 |
X-RAY |
|
2008/10/01 |
YP_001812677.1 |
|
N/A |
|
 |
390833 |
|
MG14474A |
|
MG14474A |
|
NTF2-like protein of unknown function. |
 |
| 49 |
 |
 |
3eqx |
X-RAY |
|
2008/10/01 |
NP_719793.1 |
|
N/A |
|
 |
376495 |
|
PJ02661S |
|
PJ02661S |
|
PJ02661S |
 |
| 50 |
 |
 |
3eof |
X-RAY |
|
2008/09/26 |
YP_213212.1 |
|
N/A |
|
 |
391632 |
|
MG0383AC |
|
MG0383AC |
|
Putative oxidoreductase. |
 |
| 51 |
 |
 |
3eo8 |
X-RAY |
|
2008/09/26 |
YP_001089088.1 |
|
N/A |
|
 |
391659 |
|
MG0383AE |
|
MG0383AE |
|
BluB-like flavoprotein. BluB triggers an unusual fragmentation of the FMN cofactor. |
 |
| 52 |
 |
 |
3eo7 |
X-RAY |
|
2008/09/26 |
YP_322669.1 |
|
N/A |
|
 |
390460 |
|
MG14529A |
|
MG14529A |
|
gi|75908373|ref|YP_322669.1| hypothetical protein Ava_2154 [Anabaena variabilis ATCC 29413] |
 |
| 53 |
 |
 |
3eo6 |
X-RAY |
|
2008/09/26 |
AFE_2634 |
|
N/A |
|
 |
391572 |
|
MG14668A |
|
MG14668A |
|
Protein of unknown function (DUF1255) with a cupin-like fold. |
 |
| 54 |
 |
 |
3en8 |
X-RAY |
|
2008/09/25 |
YP_553245.1 |
|
N/A |
|
 |
390635 |
|
MG14461A |
|
MG14461A |
|
NTF-2 like protein of unknown function. |
 |
| 55 |
 |
 |
3elg |
X-RAY |
|
2008/09/22 |
YP_001299723.1 |
|
N/A |
|
 |
390186 |
|
GS13115C |
|
GS13115C |
|
putative periplasmic protein of unknown function |
 |
| 56 |
 |
 |
3ele |
X-RAY |
|
2008/09/22 |
RER070207001803 |
|
N/A |
|
 |
391594 |
|
MG3309B |
|
MG3309B |
|
REr070207001803 |
 |
| 57 |
 |
 |
3ek3 |
X-RAY |
|
2008/09/18 |
YP_211706.1 |
|
N/A |
|
 |
391613 |
|
MG0120F |
|
MG0120F |
|
gi|60681562|ref|YP_211706.1| hypothetical protein BF2078 [Bacteroides fragilis NCTC 9343] |
 |
| 58 |
 |
 |
3ejv |
X-RAY |
|
2008/09/18 |
YP_498036.1 |
|
N/A |
|
 |
391050 |
|
MG14606A |
|
MG14606A |
|
Protein of unknown function with a cystatin-like fold. |
 |
| 59 |
 |
 |
3ejn |
X-RAY |
|
2008/09/18 |
YP_212639.1 |
|
N/A |
|
 |
390167 |
|
GS7807H |
|
GS7807H |
|
SusD homolog. |
 |
| 60 |
 |
 |
3ejk |
X-RAY |
|
2008/09/18 |
DDES_06JUN05_CONTIG143_REVISED_GENEDDE3696 |
|
N/A |
|
 |
390748 |
|
MG8818A |
|
MG8818A |
|
ddes_06jun05_Contig143_revised_geneDde3696 |
 |
| 61 |
 |
 |
3ehc |
X-RAY |
|
2008/09/12 |
17741376 |
|
N/A |
|
 |
390431 |
|
MG14523A |
|
MG14523A |
|
gi|17741376|gb|AAL43834.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (Dupont)] (gb|AE008689|:11241-11624, Atu3018 |
 |
| 62 |
 |
 |
3egr |
X-RAY |
|
2008/09/11 |
YP_297411.1 |
|
N/A |
|
 |
389767 |
|
PK6406E |
|
PK6406E |
|
Phenylacetate-CoA oxygenase subunit PaaB |
 |
| 63 |
 |
 |
3egq |
X-RAY |
|
2008/09/11 |
NP_070644.1 |
|
N/A |
|
 |
383741 |
|
FP0823C |
|
FP0823C |
|
TetR-family transcriptional regulator |
 |
| 64 |
 |
 |
3ege |
X-RAY |
|
2008/09/10 |
YP_324569.1 |
|
N/A |
|
 |
383250 |
|
FP8747B |
|
FP8747B |
|
Putative methyltransferase. |
 |
| 65 |
 |
 |
3ef8 |
X-RAY |
|
2008/09/08 |
YP_496742.1 |
|
N/A |
|
 |
367578 |
|
NB7857A |
|
NB7857A |
|
|
 |
| 66 |
 |
 |
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