PDB ID Method Deposition Date Accession Number Target ID Target Name Local Accession Description
2ess X-RAY 2005/10/26 BT2075 359110 BT2075 CL5916A
1vko X-RAY 2004/06/11 CE21227 1315 CE21227 CE21227 VF13D12L.3 protein.
3c1l X-RAY 2008/01/23 NP_105057.1 369153 CM5490A CM5490A The putative antioxidant defense protein (NP_105057.1) is probably a member of AhpD-like SCOP superfamily. Cys82, Cys85, and His89 are predicted to be functionally important.
2pfx X-RAY 2007/04/05 YP_614459.1 369221 CM5490D CM5490D
2qdr X-RAY 2007/06/21 NPUN_22DEC03_CONTIG1_REVISED_GENENPF5605 368884 CM7979A CM7979A
2py6 X-RAY 2007/05/15 YP_546752.1 368630 CM8004D CM8004D
2o62 X-RAY 2006/12/06 NPUN_22DEC03_CONTIG1_REVISED_GENENPR4044 369000 CM8073A CM8073A npun_22dec03_Contig1_revised_geneNpR4044
2ooc X-RAY 2007/01/25 NP_419930.1 369423 CM8385A CM8385A
2i5i X-RAY 2006/08/24 EF3048 359291 EF3048 CL6039A
3dxq X-RAY 2008/07/24 NP_106042.1 386994 EK14125A EK14125A Putative choline/ethanolamine/thiamine kinase.
3f7w X-RAY 2008/11/10 TFUS_04MAR05_CONTIG93_REVISED_GENE318 387095 EK2269L EK2269L tfus_04mar05_Contig93_revised_gene318
3dxp X-RAY 2008/07/24 YP_295230.1 387040 EK5976M EK5976M Putative acyl-CoA dehydrogenase from fatty acid metabolism.
3csv X-RAY 2008/04/10 YP_614837.1 387075 EK8604E EK8604E gi|99082683|ref|YP_614837.1| aminoglycoside phosphotransferase [Silicibacter sp. TM1040]
2r6v X-RAY 2007/09/06 NP_142786.1 375048 FB10607B FB10607B gi|14590716|ref|NP_142786.1| hypothetical protein [Pyrococcus horikoshii]
2qck X-RAY 2007/06/19 ARTH_26JUL04_CONTIG32_REVISED_GENE887 375018 FB10608A FB10608A arth_26jul04_Contig32_revised_gene887
2r0x X-RAY 2007/08/21 HSOM_08NOV04_CONTIG98_REVISED_GENE995 375038 FB10610B FB10610B hsom_08nov04_Contig98_revised_gene995
3e4v X-RAY 2008/08/12 YP_544701.1 375043 FB10611C FB10611C gi|91774945|ref|YP_544701.1| hypothetical protein Mfla_0590 [Methylobacillus flagellatus KT]
2qea X-RAY 2007/06/25 YP_508897.1 375040 FB7482B FB7482B jann_22dec04_Contig27_revised_gene3847
2q9k X-RAY 2007/06/12 YP_001814466.1 375036 FB8805A FB8805A exig_01apr05_Contig278_revised_gene1246
2p1a X-RAY 2007/03/02 NP_978475.1 366831 FG7255A FG7255A
2p11 X-RAY 2007/03/01 YP_553970.1 366852 FG7273A FG7273A
2hq7 X-RAY 2006/07/18 NP_350077.1 366858 FG7279A FG7279A gi|15896728|ref|NP_350077.1| Protein, related to general stress protein 26(GS26) of B.subtilis (pyridoxinephosphate oxidase family) [Clostridium acetobutylicum]
2hbo X-RAY 2006/06/14 NP_422103.1 366861 FG7282A FG7282A gi|16127539|ref|NP_422103.1| conserved hypothetical protein [Caulobacter crescentus CB15]
2p4g X-RAY 2007/03/12 NP_939744.1 366862 FG7283A FG7283A
2hx1 X-RAY 2006/08/02 YP_679100.1 366867 FG7288A FG7288A
2hcf X-RAY 2006/06/16 NP_662590.1 366871 FG7292A FG7292A gi|21674525|ref|NP_662590.1| hydrolase, haloacid dehalogenase-like family [Chlorobium tepidum TLS]
2q30 X-RAY 2007/05/29 YP_388795.1 366877 FG7298A FG7298A
2ozj X-RAY 2007/02/26 YP_518966.1 366882 FG7303A FG7303A
2hsz X-RAY 2006/07/24 YP_718383.1 366906 FG7325A FG7325A
2nuj X-RAY 2006/11/09 YP_509914.1 366909 FG7328A FG7328A
2hi0 X-RAY 2006/06/28 YP_813060.1 366916 FG7335A FG7335A
2own X-RAY 2007/02/16 NP_784467.1 366924 FG7343A FG7343A
2hdo X-RAY 2006/06/20 NP_784602.1 366929 FG7348A FG7348A
2o2x X-RAY 2006/11/30 NP_103874.1 366936 FG7355A FG7355A gi|13472307|ref|NP_103874.1| hypothetical protein [Mesorhizobium loti]
2hx5 X-RAY 2006/08/02 NP_895880.1 366978 FG7396A FG7396A
2hlj X-RAY 2006/07/07 NP_742468.1 366984 FG7402A FG7402A
2ifx X-RAY 2006/09/21 YP_295714.1 366988 FG7406A FG7406A
3cjx X-RAY 2008/03/14 YP_298765.1 380353 FG7408A FG7408A Protein with a cupin-like fold and unknown function.
3bf4 X-RAY 2007/11/20 YP_299883.1 381874 FG7410A FG7410A EthD-like protein (YP_299883.1) is similar to 2ftr and belongs to dimeric alpha+beta barrel proteins with ferredoxin-like fold.
2iab X-RAY 2006/09/07 NP_828636.1 367003 FG7419A FG7419A
2hhz X-RAY 2006/06/28 SSUI_28JUL04_CONTIG203_REVISED_GENE585 367043 FG7459A FG7459A
2ilb X-RAY 2006/10/02 NP_636471.1 367064 FG7480A FG7480A
3dmb X-RAY 2008/06/30 NP_637619.1 380344 FG7482A FG7482A FG7482A
2i51 X-RAY 2006/08/23 NPUN_22DEC03_CONTIG1_REVISED_GENENPF5749 367231 FH7484A FH7484A
2i02 X-RAY 2006/08/09 NPUN_22DEC03_CONTIG1_REVISED_GENENPR6570 367233 FH7486A FH7486A
2re7 X-RAY 2007/09/25 YP_263493.1 380202 FH7490A FH7490A FH7490A
2hsb X-RAY 2006/07/21 NP_069135.1 367071 FH7577A FH7577A gi|11497913|ref|NP_069135.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
2pnk X-RAY 2007/04/24 NP_241359.1 367095 FH7599A FH7599A
2ig6 X-RAY 2006/09/22 NP_349178.1 367116 FH7614A FH7614A gi|15895829|ref|NP_349178.1| NimC/NimA family protein [Clostridium acetobutylicum]
3ch0 X-RAY 2008/03/06 YP_677622.1 367128 FH7626A FH7626A Glycerophosphoryl diester phosphodiesterase.
2htd X-RAY 2006/07/25 YP_812335.1 367187 FH7681A FH7681A
2huj X-RAY 2006/07/26 NP_471338.1 367190 FH7684A FH7684A
3db0 X-RAY 2008/05/30 NP_472219.1 380201 FH7686A FH7686A FH7686A
2hq9 X-RAY 2006/07/18 NP_107146.1 367212 FH7700A FH7700A gi|13475582|ref|NP_107146.1| hypothetical protein [Mesorhizobium loti]
2ogi X-RAY 2007/01/05 NP_688652.1 370306 FJ1648A FJ1648A
2ouw X-RAY 2007/02/12 YP_425393.1 370502 FJ5490A FJ5490A
2prr X-RAY 2007/05/04 YP_296737.1 370263 FJ5490C FJ5490C
2ozg X-RAY 2007/02/26 YP_325469.1 369674 FJ8586A FJ8586A gi|75911173|ref|YP_325469.1| GCN5-related N-acetyltransferase [Anabaena variabilis ATCC 29413]
2oc5 X-RAY 2006/12/20 NP_895059.1 370119 FJ8786A FJ8786A gi|33863499|ref|NP_895059.1| hypothetical protein PMT1231 [Prochlorococcus marinus str. MIT 9313]
2oaf X-RAY 2006/12/15 JANN_22DEC04_CONTIG27_REVISED_GENE3582 370470 FJ8809A FJ8809A jann_22dec04_Contig27_revised_gene3582
2o1q X-RAY 2006/11/29 YP_001022847.1 370490 FJ8827A FJ8827A
2qeu X-RAY 2007/06/26 YP_555818.1 370496 FJ8832A FJ8832A
2onf X-RAY 2007/01/23 NP_393673.1 370499 FJ8835A FJ8835A
2pr7 X-RAY 2007/05/03 NP_599989.1 370503 FJ8838A FJ8838A
2pn2 X-RAY 2007/04/23 YP_263861.1 370504 FJ8839A FJ8839A
2obp X-RAY 2006/12/19 YP_298295.1 370563 FJ8891A FJ8891A gi|73537928|ref|YP_298295.1| putative DNA-binding protein [Ralstonia eutropha JMP134]
2o8q X-RAY 2006/12/12 YP_555756.1 369680 FJ8994A FJ8994A gi|91780549|ref|YP_555756.1| hypothetical protein Bxe_C0505 [Burkholderia xenovorans LB400]
2p2s X-RAY 2007/03/07 YP_050235.1 369785 FJ9081A FJ9081A
2pn1 X-RAY 2007/04/23 YP_001815044.1 369798 FJ9092A FJ9092A
3dde X-RAY 2008/06/05 YP_564736.1 370140 FJ9110A FJ9110A
2o2g X-RAY 2006/11/29 YP_324580.1 370216 FJ9219A FJ9219A gi|75910284|ref|YP_324580.1| Dienelactone hydrolase [Anabaena variabilis ATCC 29413]
2o7t X-RAY 2006/12/11 NP_600854.1 370229 FJ9230A FJ9230A gi|19552852|ref|NP_600854.1| transcriptional regulator [Corynebacterium glutamicum ATCC 13032]
2q04 X-RAY 2007/05/18 YP_001814707.1 370251 FJ9248A FJ9248A
2p4o X-RAY 2007/03/12 NPUN_22DEC03_CONTIG1_REVISED_GENENPF0524 369877 FJ9257A FJ9257A
2qec X-RAY 2007/06/25 NP_600742.1 373193 FJ9319A FJ9319A
2p97 X-RAY 2007/03/23 YP_323572.1 370290 FJ9329A FJ9329A gi|75909276|ref|YP_323572.1| hypothetical protein Ava_3068 [Anabaena variabilis ATCC 29413]
2ou6 X-RAY 2007/02/09 NP_294789.1 370329 FJ9406A FJ9406A
2ou5 X-RAY 2007/02/09 YP_508196.1 370379 FJ9446A FJ9446A
2q0t X-RAY 2007/05/22 YP_554324.1 370057 FJ9503A FJ9503A
2oh3 X-RAY 2007/01/09 MMAG_12JAN01_CONTIG3864_REVISED_GENE3092 370399 FJ9519A FJ9519A
2q7b X-RAY 2007/06/06 NP_689019.1 370427 FJ9546A FJ9546A
2pim X-RAY 2007/04/13 YP_298971.1 370429 FJ9548A FJ9548A
2p7h X-RAY 2007/03/20 YP_049838.1 371321 FK4030A FK4030A
2p7i X-RAY 2007/03/20 YP_049838.1 371321 FK4030A FK4030A
2oyo X-RAY 2007/02/22 YP_604910.1 371529 FK5490E FK5490E
2pke X-RAY 2007/04/17 NP_639141.1 371319 FK5749A FK5749A
3ebr X-RAY 2008/08/28 YP_294607.1 371684 FK5955B FK5955B
3d82 X-RAY 2008/05/22 YP_752209.1 387127 FK6177B FK6177B FK6177B
2ozh X-RAY 2007/02/26 NP_638301.1 371737 FK8795C FK8795C
2qww X-RAY 2007/08/10 YP_013417.1 371703 FK8798A FK8798A
2q0y X-RAY 2007/05/22 YP_295895.1 371710 FK8801A FK8801A
2opk X-RAY 2007/01/29 YP_295660.1 371797 FK8817C FK8817C
2pg3 X-RAY 2007/04/06 YP_049261.1 371338 FK9098B FK9098B
3cje X-RAY 2008/03/12 YP_509982.1 371655 FK9243B FK9243B OsmC-like hydroperoxide resistance protein
2q02 X-RAY 2007/05/18 NP_463296.1 371240 FK9279A FK9279A
2pbl X-RAY 2007/03/28 YP_614486.1 371276 FK9370B FK9370B
2opl X-RAY 2007/01/29 NP_953832.1 371567 FK9414A FK9414A
2oik X-RAY 2007/01/11 YP_546612.1 371704 FK9428A FK9428A
2oh1 X-RAY 2007/01/09 YP_013287.1 371602 FK9436A FK9436A gi|46906898|ref|YP_013287.1| acetyltransferase, GNAT family [Listeria monocytogenes str. 4b F2365]
2otm X-RAY 2007/02/08 NP_717567.1 371708 FK9452E FK9452E
3bbj X-RAY 2007/11/09 YP_290423.1 371241 FK9593A FK9593A The putative thioesterase II is homologous to thioesterase II from E. coli (1c8u).
3cjy X-RAY 2008/03/14 YP_496845.1 371292 FK9613A FK9613A
2prx X-RAY 2007/05/04 YP_001095880.1 371681 FK9665C FK9665C
2pc1 X-RAY 2007/03/29 NP_688560.1 371586 FK9742A FK9742A
2pfw X-RAY 2007/04/05 YP_751781.1 371790 FK9784A FK9784A
3cec X-RAY 2008/02/28 NPUN_22DEC03_CONTIG1_REVISED_GENENPF2943 371811 FK9788B FK9788B Putative antidote protein of plasmid maintenance system.
3c26 X-RAY 2008/01/24 NP_394282.1 376023 FL10679A FL10679A gi|16081879|ref|NP_394282.1| conserved hypothetical protein [Thermoplasma acidophilum]
3ez0 X-RAY 2008/10/22 YP_832262.1 376073 FL10716A FL10716A Protein of unknown function with ferritin-like fold.
3c1a X-RAY 2008/01/22 MMAG_12JAN01_CONTIG3880_REVISED_GENE4213 375584 FL10727A FL10727A mmag_12jan01_Contig3880_revised_gene4213
2qpx X-RAY 2007/07/25 LCAS_20SEP02_SCAFFOLD4_REVISED_GENE2707 375624 FL10757A FL10757A lcas_20sep02_Scaffold4_revised_gene2707
2raf X-RAY 2007/09/14 NP_786167.1 376078 FL10768A FL10768A gi|28379275|ref|NP_786167.1| oxidoreductase [Lactobacillus plantarum WCFS1]
2qml X-RAY 2007/07/16 NP_243487.1 376113 FL10797A FL10797A gi|15615184|ref|NP_243487.1| BH2621~unknown conserved protein in others [Bacillus halodurans]
2rau X-RAY 2007/09/17 NP_343859.1 375699 FL10866A FL10866A gi|15899254|ref|NP_343859.1| Esterase, putative [Sulfolobus solfataricus]
2qzc X-RAY 2007/08/16 NP_343586.1 376189 FL10904A FL10904A gi|15898981|ref|NP_343586.1| Transcriptional activator (tenA-1) [Sulfolobus solfataricus]
2qe8 X-RAY 2007/06/25 YP_324691.1 375721 FL10929A FL10929A gi|75910395|ref|YP_324691.1| hypothetical protein Ava_4197 [Anabaena variabilis ATCC 29413]
2qw5 X-RAY 2007/08/09 YP_324688.1 375744 FL10943A FL10943A gi|75910392|ref|YP_324688.1| Xylose isomerase-like TIM barrel [Anabaena variabilis ATCC 29413]
2r3s X-RAY 2007/08/29 NPUN_22DEC03_CONTIG1_REVISED_GENENPR0239 375748 FL10945A FL10945A npun_22dec03_Contig1_revised_geneNpR0239
2qtq X-RAY 2007/08/02 YP_496351.1 376212 FL10960A FL10960A gi|87199094|ref|YP_496351.1| transcriptional regulator, TetR family [Novosphingobium aromaticivorans DSM 12444]
2rha X-RAY 2007/10/08 YP_496351.1 376212 FL10960A FL10960A gi|87199094|ref|YP_496351.1| transcriptional regulator, TetR family [Novosphingobium aromaticivorans DSM 12444]
2r01 X-RAY 2007/08/17 NP_661249.1 376232 FL10974A FL10974A gi|21673184|ref|NP_661249.1| nitroreductase family protein [Chlorobium tepidum TLS]
2qiw X-RAY 2007/07/05 NP_600288.1 375784 FL11009A FL11009A gi|19552286|ref|NP_600288.1| putative PEP phosphonomutase [Corynebacterium glutamicum ATCC 13032]
3bwv X-RAY 2008/01/10 NP_764060.1 376319 FL11068A FL11068A Deoxyribonucleotidase-like protein is also similar to histidinol phosphatase. The predicted catalytic residues: Asp9 and Asp11. Genomic neighborhood and phylogenetic cooccurrence indicate functional association with choline transport, histidine metabolism and nitric-oxide synthesis.
2r1i X-RAY 2007/08/22 ARTH_26JUL04_CONTIG35_REVISED_GENE1183 376331 FL11080A FL11080A arth_26jul04_Contig35_revised_gene1183
2rd9 X-RAY 2007/09/21 NP_241052.1 376341 FL11165A FL11165A gi|15612749|ref|NP_241052.1| BH0186~unknown conserved protein in B. subtilis [Bacillus halodurans]
2qnl X-RAY 2007/07/18 YP_677306.1 376375 FL11193A FL11193A gi|110637099|ref|YP_677306.1| hypothetical protein CHU_0679 [Cytophaga hutchinsonii ATCC 33406]
2ql8 X-RAY 2007/07/12 YP_805721.1 376404 FL11215A FL11215A lcas_20sep02_Scaffold4_revised_gene2787
2r7h X-RAY 2007/09/07 YP_389533.1 376338 FL11216A FL11216A gi|78358084|ref|YP_389533.1| hypothetical protein Dde_3044 [Desulfovibrio desulfuricans G20]
2rff X-RAY 2007/09/28 NP_343093.1 376473 FL11223A FL11223A gi|15898488|ref|NP_343093.1| Hypothetical protein [Sulfolobus solfataricus]
2qtd X-RAY 2007/08/01 NP_247299.1 376479 FL11227A FL11227A gi|15668501|ref|NP_247299.1| M. jannaschii predicted coding region MJ0327 [Methanococcus jannaschii]
2qwz X-RAY 2007/08/10 YP_613385.1 376409 FL11268A FL11268A rose_tm1040_30mar04_Contig56_revised_gene3524
3bja X-RAY 2007/12/03 NP_978771.1 376427 FL11283A FL11283A gi|42781524|ref|NP_978771.1| transcriptional regulator, MarR family, putative [Bacillus cereus ATCC 10987]
2re2 X-RAY 2007/09/25 NP_394501.1 376464 FL11316A FL11316A gi|16082583|ref|NP_394501.1| Uncharacterized conserved protein [Thermoplasma acidophilum]
3cc1 X-RAY 2008/02/23 NP_242736.1 376515 FL11427A FL11427A Putative alpha-N-acetylgalactosaminidase with strong similarity to PDB: 1ktb
2qr6 X-RAY 2007/07/27 NP_599840.1 375605 FL1347A FL1347A gi|19551838|ref|NP_599840.1| putative inosine-5'-monophosphate dehydrogenase [Corynebacterium glutamicum ATCC 13032]
3bdi X-RAY 2007/11/14 NP_393672.1 388819 FL4049A FL4049A Predicted CIB-like hydrolase (alpha/beta superfamily) from Thermoplasma acidophilum is similar to human CCG1/TAFII250-interacting factor B (CIB). The predicted catalytic residues are: Asp157, His185 and Ser107. The conserved genomic neighbour of this protein (NP_393672.1) is a predicted metal-dependent phosphohydrolase (NP_393671.1).
2ras X-RAY 2007/09/17 YP_495839.1 376219 FL9663A FL9663A gi|87198582|ref|YP_495839.1| transcriptional regulator, TetR family [Novosphingobium aromaticivorans DSM 12444]
3b5o X-RAY 2007/10/26 NPUN_22DEC03_CONTIG1_REVISED_GENENPF6505 377778 FM11503A FM11503A CADD-like protein of unknown function. The function of ZP_00108531 could be similar to that of CT610 protein from Chlamydia trachomatis.
3b5p X-RAY 2007/10/26 NPUN_22DEC03_CONTIG1_REVISED_GENENPF6505 377778 FM11503A FM11503A CADD-like protein of unknown function. The function of ZP_00108531 could be similar to that of CT610 protein from Chlamydia trachomatis.
3cu2 X-RAY 2008/04/15 YP_718263.1 377798 FM11521A FM11521A Ribulose-5-phosphate 3-epimerase (Pfam: PF00834, NCBI: cd00429)
3bfm X-RAY 2007/11/21 YP_612389.1 377806 FM11526A FM11526A Biotin protein ligase-like protein (YP_612389.1) is unlikely to have the same function as structurally similar proteins: 2eay, 1wnl, and 1bia.
3dfu X-RAY 2008/06/12 NP_601885.1 377822 FM11540A FM11540A gi|19553883|ref|NP_601885.1| hypothetical protein NCgl2596 [Corynebacterium glutamicum ATCC 13032]
3dtt X-RAY 2008/07/15 YP_830112.1 377840 FM11555A FM11555A Putative coenzyme F420H2:NADP+ oxidoreductase.
3b5e X-RAY 2007/10/25 NP_108484.1 377848 FM11563A FM11563A Protein (NP_108484) structure is similar to carboxylesterases from Pseudomonas fluorescens (PDB code 1auo) and Bacillus cereus (PDB code 2h1i). Its sequence is similar to predicted esterases (COG0400) and phospholipases/carboxylesterases (PF02230).
3cbu X-RAY 2008/02/22 YP_295234.1 377866 FM11573B FM11573B Putative glutathione S-transferase.
3bhn X-RAY 2007/11/28 YP_001094981.1 377869 FM11578A FM11578A This protein is structurally similar to DJ-1 (PDB code: 1PS4) and the active site is also conserved.
3c8u X-RAY 2008/02/13 YP_612366.1 377904 FM11607A FM11607A rose_tm1040_30mar04_Contig54_revised_gene2462
3cu3 X-RAY 2008/04/15 NPUN_22DEC03_CONTIG1_REVISED_GENENPR1993 377910 FM11613A FM11613A npun_22dec03_Contig1_revised_geneNpR1993
3cvo X-RAY 2008/04/18 YP_167254.1 377915 FM11616A FM11616A Methyltransferase-like protein (YP_167254) of unknown function is encoded in the genomic neighborhood of SufB, SufC, SufD, and SufS (proteins involved in iron-sulfur cluster assembly). Glycine-rich loop of YP_167254 has different conformation than any known S-adenosylmethionine-binding loop found in SAM-dependent methyltransferases.
3cjd X-RAY 2008/03/12 JANN_22DEC04_CONTIG18_REVISED_GENE473 377925 FM11626A FM11626A jann_22dec04_Contig18_revised_gene473
3ceb X-RAY 2008/02/28 YP_718332.1 377935 FM11633A FM11633A This protein shares sequence similarity with the Aminotran_4 (PF01063) family from Pfam (FFAS score: -46.500). It is structurally similar to the D-aminoacid aminotransferase-like PLP-dependent enzymes family from SCOP.
2rhm X-RAY 2007/10/09 CAUR_25MAY01_CONTIG1062_REVISED_GENE931 377939 FM11637A FM11637A caur_25may01_Contig1062_revised_gene931
2rkh X-RAY 2007/10/16 MMAG_12JAN01_CONTIG3800_REVISED_GENE1537 377966 FM11660A FM11660A mmag_12jan01_Contig3800_revised_gene1537
2rbd X-RAY 2007/09/18 NP_243224.1 378013 FM11700A FM11700A gi|15614921|ref|NP_243224.1| BH2358~unknown conserved protein in B. subtilis [Bacillus halodurans]
2rfp X-RAY 2007/10/01 YP_001813558.1 378014 FM11701A FM11701A exig_01apr05_Contig259_revised_gene305
3cnx X-RAY 2008/03/26 NP_825848.1 378018 FM11705A FM11705A NTF2-like protein of unknown function.
2rfr X-RAY 2007/10/01 SARO_25NOV03_CONTIG22_REVISED_GENE168 378075 FM11750A FM11750A saro_25nov03_Contig22_revised_gene168
3d4r X-RAY 2008/05/14 NP_987166.1 381816 FM11771A FM11771A FM11771A
3bb9 X-RAY 2007/11/09 YP_750657.1 378123 FM11786A FM11786A Genomic neighborhood of the putative ketosteroid isomerase (YP_750657.1) is enriched in genes encoding proteins involved in copper resistance.
3ba3 X-RAY 2007/11/07 NP_783940.1 378137 FM11796A FM11796A gi|28377048|ref|NP_783940.1| hypothetical protein lp_0091 [Lactobacillus plantarum WCFS1]
3b8l X-RAY 2007/11/01 YP_001165924.1 378138 FM11797A FM11797A NTF2-like protein of unknown function. NTF2-like family contains: NTF2, scytalone dehydratase, ketosteroid isomerases, and a domain of CaMKII.
2rgq X-RAY 2007/10/04 NPUN_22DEC03_CONTIG1_REVISED_GENENPR3134 378141 FM11798A FM11798A npun_22dec03_Contig1_revised_geneNpR3134
3bdd X-RAY 2007/11/14 SSUI_28JUL04_CONTIG175_REVISED_GENE346 378153 FM11809A FM11809A
3d9r X-RAY 2008/05/27 YP_049581.1 378184 FM11835A FM11835A Ketosteroid isomerase-like protein with an unknown ligand. The ligand is bound in a deep aromatic cleft containing conserved Tyr19, Glu110, and Tyr127.
2r4i X-RAY 2007/08/31 YP_678039.1 378214 FM11842B FM11842B chut_08nov04_Contig199_revised_gene1260
3blz X-RAY 2007/12/11 YP_001049020.1 378217 FM11862A FM11862A sbal_17sep04_Contig227_revised_gene2123
3duk X-RAY 2008/07/17 YP_544675.1 378221 FM11862B FM11862B NTF2-like protein of unknown function.
3bl4 X-RAY 2007/12/10 YP_829618.1 378222 FM11866A FM11866A Uncharacterized protein (YP_829618.1) forms intertwined, apparently domain-swapped dimers.
3b7c X-RAY 2007/10/30 NP_715767.1 378232 FM11876A FM11876A NTF-2 like protein of unknown function
3dfe X-RAY 2008/06/11 YP_323533.1 378258 FM11897A FM11897A gi|75909237|ref|YP_323533.1| plasma membrane protein of unknown function [Anabaena variabilis ATCC 29413]
3bb5 X-RAY 2007/11/09 YP_511867.1 378282 FM11914B FM11914B Dimeric ferredoxin-like protein of unknown function similar to stress responsive proteins (Pfam07876).
2qyc X-RAY 2007/08/14 NP_888056.1 378277 FM11915A FM11915A gi|33600496|ref|NP_888056.1| hypothetical protein BB1511 [Bordetella bronchiseptica RB50]
3bn7 X-RAY 2007/12/13 NP_421070.1 378287 FM11923A FM11923A Dimeric ferredoxin-like protein.
3b5q X-RAY 2007/10/26 NP_810509.1 377304 FM11925B FM11925B gi|29347006|ref|NP_810509.1| putative sulfatase yidJ [Bacteroides thetaiotaomicron VPI-5482]
3c8v X-RAY 2008/02/13 YP_390128.1 377310 FM11964A FM11964A ddes_06jun05_Contig143_revised_geneDde3640
3bde X-RAY 2007/11/14 NP_106155.1 378291 FM11977A FM11977A gi|13474586|ref|NP_106155.1| unknown protein [Mesorhizobium loti]
3ce8 X-RAY 2008/02/28 YP_001048502.1 378293 FM11978A FM11978A Putative PII-like nitrogen regulatory protein.
2ril X-RAY 2007/10/11 YP_001095275.1 378300 FM11984A FM11984A shew_20dec04_Contig154_revised_gene2652
3bgu X-RAY 2007/11/27 YP_288824.1 378307 FM11991A FM11991A Dimeric ferredoxin-like protein of unknown function.
3bm7 X-RAY 2007/12/12 NP_420935.1 378310 FM11993A FM11993A Protein of unknown function with ferredoxin-like fold belongs to superfamily of dimeric alpha+beta barrels.
2rij X-RAY 2007/10/11 NP_282733.1 377381 FM12041A FM12041A gi|15792910|ref|NP_282733.1| possible 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [Campylobacter jejuni]
3b7f X-RAY 2007/10/30 YP_299179.1 377390 FM12049A FM12049A Domain of Unknown Function with a 7-Bladed Beta-Propeller Fold
This structure has a 7-bladed beta-propeller fold. It is structurally similar to all of the chains of 1jof, 1sqj, and 2ebs. However, none of the active site from either 1sqj or 2ebs is conserved in this structure. His148 from 1jofA can be aligned to His169 from this structure using Dali or VAST. However, this is not enough conservation to suggest that 1jof and this structure have the same function.
This protein contains 5 detectable copies of the BNR (bacterial neuraminidase repeat)/Asp-box repeat (PF02012)from Pfam: 83-94, 140-151, 201-212, 315-326, and 365-376. Residues 81-374 hit COG4447: Uncharacterized protein related to plant photosystem II stability/assembly factor using CD-Search.
3dzz X-RAY 2008/07/30 YP_813084.1 377395 FM12053A FM12053A Putative pyridoxal 5'-phosphate-dependent C-S lyase.
2rcc X-RAY 2007/09/19 NP_241368.1 377460 FM12098A FM12098A gi|15613065|ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus halodurans]
3c18 X-RAY 2008/01/22 YP_001813159.1 377609 FM12207A FM12207A Nucleotidyltransferase-like protein with C-terminal DNA-binding domain (putative).
3ce9 X-RAY 2008/02/28 NP_348253.1 379134 FN0285A FN0285A Glycerol dehydrogenase.
3dlc X-RAY 2008/06/27 NP_988299.1 387106 FN0318R FN0318R FN0318R
3cea X-RAY 2008/02/28 NP_786804.1 379488 FN0414A FN0414A Myo-inositol 2-dehydrogenase.
3do5 X-RAY 2008/07/03 NP_069768.1 378947 FN0547B FN0547B gi|11498540|ref|NP_069768.1| homoserine dehydrogenase (hom) [Archaeoglobus fulgidus DSM 4304]
3bhq X-RAY 2007/11/28 NP_105615.1 379524 FN0823I FN0823I TetR-family transcriptional regulator.
3ddj X-RAY 2008/06/05 NP_344512.1 380014 FN0829A FN0829A CBS domain-containing protein in complex with AMP.
3b81 X-RAY 2007/10/31 NP_350189.1 379155 FN10807A FN10807A predicted DNA-binding transcriptional regulator of TetR/AcrR family
3c24 X-RAY 2008/01/24 YP_511008.1 379416 FN11125A FN11125A gi|89055557|ref|YP_511008.1| hypothetical protein Jann_3066 [Jannaschia sp. CCS1]
3cgx X-RAY 2008/03/06 YP_389115.1 379240 FN11585A FN11585A gi|78357666|ref|YP_389115.1| hypothetical protein Dde_2624 [Desulfovibrio desulfuricans G20]
3bby X-RAY 2007/11/11 NP_416804.1 379351 FN12316A FN12316A Glutathione S-transferase.
3bln X-RAY 2007/12/11 NP_981174.1 379032 FN12435A FN12435A Acetyltransferase (GNAT family).
3d4o X-RAY 2008/05/14 NP_243269.1 379058 FN12445A FN12445A gi|15614966|ref|NP_243269.1| dipicolinate synthase subunit A [Bacillus halodurans]
3clm X-RAY 2008/03/19 YP_208650.1 379639 FN12523B FN12523B The protein structure of transaldolase (YP_208650.1) is almost identical to transaldolase B from Escherichia coli (PDB code 1onr).
3db2 X-RAY 2008/05/30 DHAF_12NOV03_CONTIG1044_REVISED_GENE999 379259 FN12543A FN12543A Putative NADPH-dependent oxidoreductase.
3cnh X-RAY 2008/03/25 NP_295428.1 379311 FN12557A FN12557A Predicted hydrolase of haloacid dehalogenase-like superfamily.
3ddd X-RAY 2008/06/05 NP_142035.1 379751 FN12657A FN12657A gi|14589974|ref|NP_142035.1| hypothetical protein [Pyrococcus horikoshii]
3ck1 X-RAY 2008/03/14 YP_296387.1 379793 FN7456B FN7456B The putative thioesterase (EC 3.1.2.-) may be involved in benzoate degradation via CoA ligation or in limonene and pinene degradation. It is similar to protein structures with PDB codes: 2oaf, 1s5u, 2egi, 2av9, and 1z54.
3c5y X-RAY 2008/02/01 YP_001165900.1 379606 FN7543A FN7543A The putative ribose 5-phosphate isomerase has sequence and structural similarity to RpiB from Streptococcus pneumoniae (PDB code 2ppw).
3cvj X-RAY 2008/04/18 NP_244191.1 379051 FN8771A FN8771A Putative phosphoheptose isomerase from fructose and mannose metabolism is a member of COG4821.
3bwx X-RAY 2008/01/10 YP_496220.1 387108 FN9260E FN9260E FN9260E
3ec4 X-RAY 2008/08/28 YP_497011.1 379619 FN9311B FN9311B saro_25nov03_Contig29_revised_gene2472
3bxp X-RAY 2008/01/14 NP_786266.1 379483 FN9390A FN9390A Putative carboxylesterase.
3bjr X-RAY 2007/12/04 NP_784706.1 379491 FN9390B FN9390B gi|28377814|ref|NP_784706.1| lipase/esterase (putative) [Lactobacillus plantarum WCFS1]
3bkx X-RAY 2007/12/07 YP_807781.1 379434 FN9394A FN9394A Cyclopropane-fatty-acyl-phospholipid synthase-like protein (YP_807781.1) has strong similarity to SAM-dependent methyltransferases. Cofactor binding (carbonate-ion) residues, such as His129, Trp159, and Glu158 (predicted) are required for methylene transfer activity.
3d8p X-RAY 2008/05/23 NP_373092.1 379875 FN9546A FN9546A Acetyltransferase of GNAT family, where Tyr129 is predicted as the catalytic residue.
3cwr X-RAY 2008/04/22 YP_425770.1 379808 FN9673I FN9673I Transcriptional regulator of TetR family (YP_425770) and proteins with putative antimicrobial activity are encoded by neighboring genes.
3bcw X-RAY 2007/11/13 NP_887725.1 379020 FN9772A FN9772A gi|33600165|ref|NP_887725.1| hypothetical protein BB1179 [Bordetella bronchiseptica RB50]
3bkw X-RAY 2007/12/07 NP_104914.1 379544 FN9827A FN9827A S-adenosylmethionine dependent methyltransferase.
3bdv X-RAY 2007/11/15 YP_051181.1 379345 FN9870A FN9870A YdeN-like protein of unknown function (DUF1234) from superfamily of alpha/beta hydrolases.
3egq X-RAY 2008/09/11 NP_070644.1 383741 FP0823C FP0823C TetR-family transcriptional regulator
3d2l X-RAY 2008/05/08 YP_001813268.1 383355 FP0938B FP0938B SAM-dependent methyltransferase.
3di4 X-RAY 2008/06/19 YP_165628.1 383110 FP10366A FP10366A Protein of unknown function (DUF1989/COG3665) with complex topology and detectable structural similarity to concanavalin A-like lectins/glucanases.
3d1c X-RAY 2008/05/05 NP_373108.1 382610 FP10572B FP10572B gi|15925574|ref|NP_373108.1| probable monooxygenase [Staphylococcus aureus subsp. aureus Mu50]
3cgv X-RAY 2008/03/06 NP_393992.1 382454 FP10738A FP10738A Geranylgeranyl bacteriochlorophyll reductase-like FixC homolog is a member of COG0644.
3dee X-RAY 2008/06/09 YP_208969.1 389948 FP12834A FP12834A Putative regulatory protein functionally associated with DUF692, DUF560, and DUF452.
3clo X-RAY 2008/03/19 NP_811094.1 383272 FP13075B FP13075B gi|29347591|ref|NP_811094.1| transcriptional regulator [Bacteroides thetaiotaomicron VPI-5482]
3ccf X-RAY 2008/02/25 YP_321342.1 383249 FP2288D FP2288D Putative methyltransferase.
3dcf X-RAY 2008/06/03 TFUS_04MAR05_CONTIG93_REVISED_GENE761 390257 FP2858A FP2858A Putative transcriptional regulator of the TetR/AcrR family is similar to C-terminal region (inducing compounds-binding) of QacR.
3cc8 X-RAY 2008/02/25 NP_977653.1 383436 FP4030W FP4030W Putative methyltransferase from NDP-N-methyl-L-glucosamine biosynthetic pathway.
3dkq X-RAY 2008/06/25 YP_001051978.1 383464 FP4102A FP4102A sbal_17sep04_Contig236_revised_gene2668
3cny X-RAY 2008/03/26 NP_786806.1 383008 FP6320A FP6320A gi|28379914|ref|NP_786806.1| inositol catabolism protein IolE [Lactobacillus plantarum WCFS1]
3fcn X-RAY 2008/11/21 YP_428290.1 383760 FP6436A FP6436A An alpha-helical protein of unknown function (Pfam01724). It is in genomic neighborhood of rnhB (Ribonuclease HII).
3d00 X-RAY 2008/04/30 YP_460196.1 383639 FP7651A FP7651A Tungsten formylmethanofuran dehydrogenase subunit E (FwdE).
3ege X-RAY 2008/09/10 YP_324569.1 383250 FP8747B FP8747B Putative methyltransferase.
3d5p X-RAY 2008/05/16 YP_211376.1 388451 GD10527A GD10527A Putative glucan synthesis regulator of Smi1/Knr4 family.
3dv8 X-RAY 2008/07/18 RER070207001219 388639 GD10876A GD10876A Transcriptional regulator, Crp/Fnr family.
3e0z X-RAY 2008/08/01 RER070207001348 388609 GD14262A GD14262A Protein of unknown function.
3dao X-RAY 2008/05/29 RER070207001050 388491 GD4050C GD4050C REr070207001050
3e0f X-RAY 2008/07/31 YP_910028.1 387987 GD7939A GD7939A gi|119026183|ref|YP_910028.1| hypothetical protein BAD_1165 [Bifidobacterium adolescentis ATCC 15703]
3edo X-RAY 2008/09/03 YP_193882.1 388454 GD9765C GD9765C gi|58337297|ref|YP_193882.1| putative trp repressor binding protein [Lactobacillus acidophilus NCFM]
3by7 X-RAY 2008/01/15 JCVI_PEP_1096686650277 380229 GN7729A GN7729A The Sm-like protein (ECX21941.1) sequence conservation is different than in structurally similar proteins. Its gene is observed in the neighborhood of genes encoding ribosomal protein S6 modification protein, ferredoxin, and DNA polymerase.
2op5 X-RAY 2007/01/26 JCVI_PEP_1096672785533 367476 GN7730A GN7730A
2od4 X-RAY 2006/12/21 JCVI_PEP_1096665735785 367439 GN7738A GN7738A tcag|1096665735785
2od5 X-RAY 2006/12/21 JCVI_PEP_1096688149193 367491 GN7747A GN7747A tcag|1096688149193
2od6 X-RAY 2006/12/21 JCVI_PEP_1096682647733 367441 GN7757A GN7757A tcag|1096682647733
2pgc X-RAY 2007/04/09 JCVI_PEP_1096685590403 367457 GN7773A GN7773A tcag|1096685590403
3e38 X-RAY 2008/08/06 YP_001300751.1 390183 GS12090A GS12090A two-domain protein containing predicted PHP-like metal-dependent phosphoesterase
3due X-RAY 2008/07/17 YP_001300247.1 390185 GS13115A GS13115A GS13115A
3elg X-RAY 2008/09/22 YP_001299723.1 390186 GS13115C GS13115C putative periplasmic protein of unknown function
3d33 X-RAY 2008/05/09 YP_001297618.1 390198 GS13144A GS13144A GS13144A
3d4e X-RAY 2008/05/14 NP_721579.1 390321 GS13262A GS13262A Putative beta-lactamase inhibitor protein.
3fdh X-RAY 2008/11/25 NP_810946.1 393011 GS13599A GS13599A Outer membrane nutrient binding protein from SusD/RagB family.
3f1z X-RAY 2008/10/28 YP_001337197.1 390051 GS13722A GS13722A Putative nucleic acid-binding lipoprotein.
3cjm X-RAY 2008/03/13 NP_815223.1 389964 GS13767A GS13767A GS13767A
3d02 X-RAY 2008/04/30 YP_001338366.1 390056 GS13859A GS13859A Periplasmic sugar-binding protein.
3eu8 X-RAY 2008/10/09 YP_210071.1 390129 GS13905B GS13905B Putative glucoamylase.
3dza X-RAY 2008/07/29 YP_001337144.1 390304 GS14063A GS14063A Putative membrane protein of unknown function (NCBI:PRK10316). May be functionally associated with regulation of fimbrial expression and/or response to leucine.
3db7 X-RAY 2008/05/30 NP_809836.1 389981 GS14096A GS14096A The putative calcium-regulated periplasmic protein of unknown function (BT0923) may be functionally associated with its genomic neighbors: BT0922 (putative lipoprotein) and BT0924 (predicted membrane protein).
3ejn X-RAY 2008/09/18 YP_212639.1 390167 GS7807H GS7807H SusD homolog.
3cgh X-RAY 2008/03/05 NP_812895.1 389990 GS7807P GS7807P SusD homolog. SusD is a secreted starch-binding protein with an N-terminal lipid tail that allows it to associate with the outer membrane.
2qj8 X-RAY 2007/07/06 NP_106651.1 375129 HP10622H HP10622H gi|13475087|ref|NP_106651.1| hypothetical protein [Mesorhizobium loti]
3ct9 X-RAY 2008/04/11 NP_812461.1 375081 HP10625B HP10625B gi|29348958|ref|NP_812461.1| acetylornithine deacetylase [Bacteroides thetaiotaomicron VPI-5482]
3cpx X-RAY 2008/04/01 YP_676701.1 375102 HP10638A HP10638A chut_08nov04_Contig199_revised_gene62
2qvp X-RAY 2007/08/08 YP_926603.1 375152 HP10645A HP10645A sama_14oct04_Contig98_revised_gene3369
3b2y X-RAY 2007/10/19 YP_563529.1 375165 HP10645E HP10645E Carboxypeptidases, desuccinylases, aspartoacylases and uncharacterized protein YP_563529.1 are similar to each other and belong to metallopeptidases containing co-catalytic metalloactive sites.
2rb7 X-RAY 2007/09/18 DDES_06JUN05_CONTIG143_REVISED_GENEDDE1186 375105 HP1666A HP1666A ddes_06jun05_Contig143_revised_geneDde1186
2qyv X-RAY 2007/08/15 YP_718209.1 375116 HP9625C HP9625C gi|113460153|ref|YP_718209.1| Xaa-His dipeptidase (aminoacyl-histidine dipeptidase) [Haemophilus somnus 129PT]
2pq7 X-RAY 2007/05/01 104161995 371986 ME9797A ME9797A
3ek3 X-RAY 2008/09/18 YP_211706.1 391613 MG0120F MG0120F gi|60681562|ref|YP_211706.1| hypothetical protein BF2078 [Bacteroides fragilis NCTC 9343]
3eof X-RAY 2008/09/26 YP_213212.1 391632 MG0383AC MG0383AC Putative oxidoreductase.
3eo8 X-RAY 2008/09/26 YP_001089088.1 391659 MG0383AE MG0383AE BluB-like flavoprotein. BluB triggers an unusual fragmentation of the FMN cofactor.
3e10 X-RAY 2008/08/01 NP_348178.1 390674 MG0383C MG0383C gi|15894829|ref|NP_348178.1| Nitroreductase family protein [Clostridium acetobutylicum]
3e39 X-RAY 2008/08/06 YP_387283.1 390745 MG0383I MG0383I gi|78355834|ref|YP_387283.1| nitroreductase family protein [Desulfovibrio desulfuricans G20]
3etn X-RAY 2008/10/08 YP_209877.1 391616 MG0829AS MG0829AS Putative phosphosugar isomerase. Similar to Leptospira interrogans polysialic acid capsule expression protein KpsF
3e97 X-RAY 2008/08/21 DGEO_15APR04_CONTIG105_REVISED_GENE503 390750 MG10808B MG10808B Transcriptional regulator, Crp/Fnr family.
3eua X-RAY 2008/10/09 NP_391141.1 390575 MG10938A MG10938A Putative phosphosugar isomerase (COG2222) and hypothetical sugar kinase YurL have similar phylogenetic cooccurrence and are encoded by genes from the same genomic neighborhood.
3f6t X-RAY 2008/11/06 YP_194538.1 391714 MG11333F MG11333F Aspartate aminotransferase (E.C. 2.6.1.1). It is in the conserved genomic neighborhood of aspartate alanine antiporter.
3eby X-RAY 2008/08/28 YP_001165631.1 391042 MG11732J MG11732J The beta subunit of a putative aromatic-ring-hydroxylating dioxygenase.
3f0h X-RAY 2008/10/24 RER070207000802 391588 MG1400B MG1400B REr070207000802
3dxo X-RAY 2008/07/24 17739112 390424 MG14441A MG14441A gi|17739112|gb|AAL41760.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (Dupont)] (gb|AE008688|:742330-742692, Atu0744
3e99 X-RAY 2008/08/21 YP_105014.1 390534 MG14458B MG14458B gi|53716528|ref|YP_105014.1| benzoate 1,2-dioxygenase beta subunit [Burkholderia mallei ATCC 23344]
3en8 X-RAY 2008/09/25 YP_553245.1 390635 MG14461A MG14461A NTF-2 like protein of unknown function.
3ezs X-RAY 2008/10/23 NP_207418.1 390859 MG14465B MG14465B Aminotransferase AspB.
3er7 X-RAY 2008/10/01 YP_001812677.1 390833 MG14474A MG14474A NTF2-like protein of unknown function.
3fdb X-RAY 2008/11/25 NP_940074.1 390709 MG14491A MG14491A Putative PLP-dependent beta-cystathionase.
3ez1 X-RAY 2008/10/22 YP_604413.1 390749 MG14492C MG14492C Putative aminotransferase (MocR family). This protein may be functionally associated with bacterial regulatory proteins (GntR superfamily).
3f14 X-RAY 2008/10/27 YP_680363.1 390726 MG14500A MG14500A NTF2-like protein of unknown function.
3f40 X-RAY 2008/10/31 YP_677363.1 390727 MG14501A MG14501A NTF2-like protein of unknown function.
3euc X-RAY 2008/10/09 YP_297314.1 391227 MG14503Q MG14503Q Histidinol-phosphate aminotransferase.
3e8o X-RAY 2008/08/20 NP_295823.1 390777 MG14516A MG14516A Protein of unknown function with ferredoxin-like fold.
3f8x X-RAY 2008/11/13 YP_050331.1 390788 MG14518A MG14518A Putative delta-5-3-ketosteroid isomerase.
3ehc X-RAY 2008/09/12 17741376 390431 MG14523A MG14523A gi|17741376|gb|AAL43834.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (Dupont)] (gb|AE008689|:11241-11624, Atu3018
3es4 X-RAY 2008/10/03 17741406 390432 MG14524A MG14524A Protein of unknown function (DUF861) with a RmlC-like cupin fold.
3ecf X-RAY 2008/08/29 YP_324687.1 390455 MG14528A MG14528A gi|75910391|ref|YP_324687.1| hypothetical protein Ava_4193 [Anabaena variabilis ATCC 29413]
3eo7 X-RAY 2008/09/26 YP_322669.1 390460 MG14529A MG14529A gi|75908373|ref|YP_322669.1| hypothetical protein Ava_2154 [Anabaena variabilis ATCC 29413]
3ec9 X-RAY 2008/08/29 YP_440611.1 390600 MG14540C MG14540C NTF2-like protein of unknown function.
3ebt X-RAY 2008/08/28 YP_110153.1 390547 MG14545A MG14545A NTF2-like protein of unknown function.
3f7x X-RAY 2008/11/10 NP_743055.1 391191 MG14561C MG14561C Putative polyketide cyclase.
3f8h X-RAY 2008/11/12 YP_611791.1 391384 MG14561D MG14561D Putative polyketide cyclase. Analysis of genomic neighborhood and phylogenetic profiles indicate that this protein may be functionally associated with nitrilases that break carbon-nitrogen bonds.
3fcr X-RAY 2008/11/22 YP_614685.1 391382 MG14585B MG14585B Putative PLP-dependent aminotransferase.
3ejv X-RAY 2008/09/18 YP_498036.1 391050 MG14606A MG14606A Protein of unknown function with a cystatin-like fold.
3eo6 X-RAY 2008/09/26 AFE_2634 391572 MG14668A MG14668A Protein of unknown function (DUF1255) with a cupin-like fold.
3ezu X-RAY 2008/10/23 NP_951600.1 390844 MG1588A MG1588A Multidomain protein of unknown function with GGDEF-domain. A wide range of signaling proteins contain a conserved helical segment. It is possible that two alpha helices (between ferritin-like domain and GGDEF-domain) are part of such conserved segment.
3f9t X-RAY 2008/11/14 NP_247014.1 390948 MG2021G MG2021G L-tyrosine decarboxylase MfnA (EC 4.1.1.25).
3ele X-RAY 2008/09/22 RER070207001803 391594 MG3309B MG3309B REr070207001803
3f9s X-RAY 2008/11/14 AFE_2539 391571 MG5552I MG5552I Putative polyketide cyclase.
3f7s X-RAY 2008/11/10 NP_746665.1 391198 MG5690C MG5690C NTF2-like protein of unknown function.
3f44 X-RAY 2008/10/31 YP_193413.1 391715 MG8150B MG8150B Putative monooxygenase. May be involved in phospholipid metabolism.
3ejk X-RAY 2008/09/18 DDES_06JUN05_CONTIG143_REVISED_GENEDDE3696 390748 MG8818A MG8818A ddes_06jun05_Contig143_revised_geneDde3696
3es1 X-RAY 2008/10/03 YP_001165807.1 391033 MG9341A MG9341A Protein with a cupin-like fold and unknown function.
3fd0 X-RAY 2008/11/24 NP_470671.1 390899 MG9652H MG9652H Putative cystathionine beta-lyase involved in aluminum resistance (Pfam06838/COG4100).
3dmc X-RAY 2008/06/30 YP_322774.1 367507 NB7795A NB7795A
3ct8 X-RAY 2008/04/11 NP_243026.1 367517 NB7805A NB7805A
3cjl X-RAY 2008/03/13 YP_050007.1 367548 NB7833A NB7833A
3e5d X-RAY 2008/08/13 YP_013033.1 367570 NB7852A NB7852A
3ef8 X-RAY 2008/09/08 YP_496742.1 367578 NB7857A NB7857A
1vmi X-RAY 2004/09/28 NP_416953.1 358288 NP416953 EC5317A Ethanolamine utilization protein eutD.
1z9t X-RAY 2005/04/04 NP_417084.1 358298 NP417084 EC5325A Hypothetical UPF0124 protein yfiH.
1vly X-RAY 2004/08/20 NP_417374.1 358289 NP417374 MB2247A Unknown protein from 2D-page (Spot PR51).
1vlo X-RAY 2004/08/05 NP_417381.1 358290 NP417381 EC5318A
1zej X-RAY 2005/04/18 NP_070841.1 356320 NP_070841.1 IB3841A 3-hydroxyacyl-CoA dehydrogenase (HBD-9).
1vpm X-RAY 2004/11/11 NP_241664.1 356420 NP_241664.1 IB4506A Acyl-CoA hydrolase.
2fup X-RAY 2006/01/27 NP_252042.1 369551 NP_252042.1 CL6182A
2awa X-RAY 2005/08/31 NP_344555.1 358603 NP_344555.1 XB5465A DNA polymerase III, beta chain (EC 2.7.7.7).
2go7 X-RAY 2006/04/12 NP_346487.1 359637 NP_346487.1 CL5766A
1vqs X-RAY 2004/12/20 NP_356412.1 356437 NP_356412.1 MB2347A Hypothetical protein Atu4242.
2a6b X-RAY 2005/07/02 NP_358222.1 358745 NP_358222.1 XB5607A
2a9v X-RAY 2005/07/12 NP_394403.1 356213 NP_394403.1 SB4281A
1vqy X-RAY 2005/01/07 NP_396154.1 356436 NP_396154.1 IB2347B Hypothetical protein Atu5224.
2aj6 X-RAY 2005/08/01 NP_645455.1 358652 NP_645455.1 XB5514A
2ets X-RAY 2005/10/27 NP_646154.1 374925 NP_646154.1 XB5462A NP_646154.1
2hr2 X-RAY 2006/07/19 NP_663012.1 366651 NP_663012.1 CL5998A
2huh X-RAY 2006/07/26 NP_811092.1 359113 NP_811092.1 CL5919A
3cuc X-RAY 2008/04/16 NP_811426.1 371850 NP_811426.1 CL5922A
2fg9 X-RAY 2005/12/21 NP_811990.1 359120 NP_811990.1 CL5926A
2a2o X-RAY 2005/06/22 NP_812058.1 358760 NP_812058.1 XB5622A
2a2m X-RAY 2005/06/22 NP_812058.1 358760 NP_812058.1 XB5622A
1zyb X-RAY 2005/06/09 NP_813211.1 358851 NP_813211.1 XB5713A
2okc X-RAY 2007/01/16 NP_813429.1 363548 NP_813429.1 CL5940A
2a6c X-RAY 2005/07/02 NP_841403.1 358727 NP_841403.1 XB5589A
2ich X-RAY 2006/09/12 NP_841447.1 360535 NP_841447.1 CL6107A gi|30249377|ref|NP_841447.1| putative AttH [Nitrosomonas europaea ATCC 19718]
2fqp X-RAY 2006/01/18 NP_880937.1 359159 NP_880937.1 CL5950A
3bos X-RAY 2007/12/17 SAMA_14OCT04_CONTIG53_REVISED_GENE1514 378832 NT12250A NT12250A Putative DNA replication regulator Hda is likely to be a CTPase.
2hbw X-RAY 2006/06/14 YP_323898.1 360689 PC00877A PC00877A
2gnr X-RAY 2006/04/10 13815350 361217 PC01796D PC01796D
2pv7 X-RAY 2007/05/09 1574749 374967 PC02153D PC02153D PC02153D
2glz X-RAY 2006/04/05 DHAF_12NOV03_CONTIG982_REVISED_GENE4728 361000 PC02663C PC02663C
2gvi X-RAY 2006/05/02 10640422 361192 PC02663D PC02663D
2osd X-RAY 2007/02/05 1592102 373077 PC02830C PC02830C
2oso X-RAY 2007/02/06 1592102 373077 PC02830C PC02830C
2h1q X-RAY 2006/05/16 DHAF_12NOV03_CONTIG1056_REVISED_GENE1477 360984 PC04016A PC04016A
2ghr X-RAY 2006/03/27 NP_981826.1 360725 PC04204A PC04204A
2ga1 X-RAY 2006/03/07 YP_321193.1 360696 PC04255A PC04255A
2gvk X-RAY 2006/05/02 NP_810132.1 361324 PC04261D PC04261D
2iiz X-RAY 2006/09/28 NP_716371.1 360890 PC04261E PC04261E
2hag X-RAY 2006/06/12 NP_716371.1 360890 PC04261E PC04261E
3cm1 X-RAY 2008/03/20 YP_290167.1 361176 PC04686E PC04686E YP_290167 belongs to SsgA-like sporulation-specific cell division proteins, where SsgA and SsgB are essential for sporulation-specific cell division in S. coelicolor, SsgC-G are responsible for correct DNA segregation/condensation (SsgC), spore wall synthesis (SsgD), autolytic spore separation (SsgE, SsgF), or exact septum localisation (SsgG) [Noens et al. (2005) Mol Microbiol 58: 929-944]
2gpj X-RAY 2006/04/17 YP_001181611.1 361165 PC04954E PC04954E
2hkv X-RAY 2006/07/05 YP_001813732.1 361006 PC05163A PC05163A
2rld X-RAY 2007/10/18 NP_809265.1 380318 PC05635E PC05635E The uncharacterized protein (NP_809265.1) is similar to Xcc0516 from Xanthomonas campestris - a protein with a novel quaternary structure assembled by five four-helix bundles.
2gc9 X-RAY 2006/03/13 NP_786857.1 360800 PC05870A PC05870A
2p8g X-RAY 2007/03/22 2635953 370637 PC05870B PC05870B
2gm6 X-RAY 2006/04/05 YP_299237.1 361076 PC05995D PC05995D
2itb X-RAY 2006/10/19 NP_744337.1 360824 PC06175E PC06175E
2pyt X-RAY 2007/05/16 16421009 374979 PC06249B PC06249B PC06249B
2qne X-RAY 2007/07/18 DHAF_12NOV03_CONTIG1082_REVISED_GENE2974 360990 PC06253A PC06253A
2o3l X-RAY 2006/12/01 NP_979748.1 372072 PC06304A PC06304A
2o4t X-RAY 2006/12/04 10176601 372074 PC06304B PC06304B
2hh6 X-RAY 2006/06/27 10176605 361188 PC06304D PC06304D
2h1t X-RAY 2006/05/16 NP_250684.1 361385 PC06475C PC06475C
2qjv X-RAY 2007/07/09 16422983 373908 PC06845C PC06845C PC06845C
2ra9 X-RAY 2007/09/14 YP_001050848.1 380281 PC06938B PC06938B PC06938B
2gjg X-RAY 2006/03/30 NP_746511.1 360827 PC07317D PC07317D
2gpi X-RAY 2006/04/17 YP_001095851.1 361143 PC07369B PC07369B
2obn X-RAY 2006/12/19 YP_324013.1 370701 PC07755A PC07755A
3b77 X-RAY 2007/10/30 YP_001814629.1 380276 PC08000A PC08000A Protein of unknown function (DUF1696) with pleckstrin-homology domain.
3dcx X-RAY 2008/06/04 YP_001092950.1 380289 PC08000B PC08000B PC08000B
2iiu X-RAY 2006/09/28 NP_719307.1 366232 PD01865F PD01865F
2olt X-RAY 2007/01/19 NP_719307.1 366232 PD01865F PD01865F
2o2z X-RAY 2006/11/30 NP_244435.1 372969 PD01933B PD01933B gi|15616130|ref|NP_244435.1| BH3568~unknown conserved protein [Bacillus halodurans]
2q7x X-RAY 2007/06/07 NP_346012.1 366227 PD01933D PD01933D
2ppv X-RAY 2007/04/30 NP_764104.1 366230 PD01933E PD01933E
2h9f X-RAY 2006/06/09 NP_249484.1 366300 PD04303G PD04303G gi|15595990|ref|NP_249484.1| hypothetical protein [Pseudomonas aeruginosa PA01]
2qez X-RAY 2007/06/26 YP_013784.1 366145 PD06751F PD06751F
2ou3 X-RAY 2007/02/09 NPUN_22DEC03_CONTIG1_REVISED_GENENPF6341 373118 PD07049G PD07049G
2o08 X-RAY 2006/11/27 NP_242193.1 367737 PE00002B PE00002B gi|15613890|ref|NP_242193.1| BH1327~unknown conserved protein [Bacillus halodurans]
3ccg X-RAY 2008/02/25 NP_347894.1 367850 PE00002C PE00002C Predicted HD superfamily hydrolase involved in NAD metabolism.
2hyt X-RAY 2006/08/07 YP_049917.1 367950 PE00003C PE00003C
2prv X-RAY 2007/05/04 NP_389780.1 367783 PE00012A PE00012A
2icg X-RAY 2006/09/12 NP_472245.1 368054 PE00012N PE00012N
2oc6 X-RAY 2006/12/20 NP_388456.1 367782 PE00025A PE00025A gi|16077642|ref|NP_388456.1| similar to hypothetical proteins from B. subtilis [Bacillus subtilis]
2i8d X-RAY 2006/09/01 YP_807469.1 368040 PE00025C PE00025C
2okf X-RAY 2007/01/16 YP_323815.1 367680 PE00035A PE00035A
2nlv X-RAY 2006/10/20 YP_324325.1 367696 PE00035B PE00035B
2inb X-RAY 2006/10/06 NPUN_22DEC03_CONTIG1_REVISED_GENENPF2941 368168 PE00035C PE00035C
3d7q X-RAY 2008/05/21 NPUN_22DEC03_PLASMIDA_REVISED_GENEPNPAR114 368193 PE00035E PE00035E XisI protein-like.
2it9 X-RAY 2006/10/19 PROC_21JUN05_CONTIG39_REVISED_GENEPMN12A0962 368256 PE00037D PE00037D
2nvn X-RAY 2006/11/13 YP_400729.1 368396 PE00037E PE00037E
2q22 X-RAY 2007/05/25 YP_323524.1 367679 PE00044A PE00044A
2iay X-RAY 2006/09/08 NP_785678.1 368074 PE00055D PE00055D
2nvm X-RAY 2006/11/13 YP_321976.1 367675 PE00057A PE00057A
2nwv X-RAY 2006/11/16 YP_323822.1 367681 PE00057B PE00057B
2nyh X-RAY 2006/11/20 YP_555069.1 367834 PE00092A PE00092A
2p8i X-RAY 2007/03/22 YP_555069.1 367834 PE00092A PE00092A
2peb X-RAY 2007/04/02 NPUN_22DEC03_CONTIG1_REVISED_GENENPF1925 374007 PE00092D PE00092D PE00092D
2ia7 X-RAY 2006/09/07 NP_952040.1 367993 PE00139F PE00139F
2oqm X-RAY 2007/01/31 YP_561575.1 368328 PE00238G PE00238G
2p10 X-RAY 2007/03/01 NP_085906.1 368116 PE00293D PE00293D
2i9w X-RAY 2006/09/06 YP_265345.1 368209 PE00389E PE00389E
2r44 X-RAY 2007/08/30 YP_676785.1 372359 PG1132I PG1132I
3cgg X-RAY 2008/03/05 NP_600671.1 372498 PG2288B PG2288B TehB-like SAM-dependent methyltransferase.
2rcd X-RAY 2007/09/19 YP_051588.1 372199 PG8359C PG8359C uncharacterized protein conserved in bacteria with a cystatin-like fold
gi|50122421|ref|YP_051588.1| hypothetical protein ECA3500 [Erwinia carotovora subsp. atroseptica SCRI1043]
2owp X-RAY 2007/02/16 YP_553940.1 372960 PG8359F PG8359F
2q3l X-RAY 2007/05/30 YP_001095227.1 372337 PG9822C PG9822C
2ook X-RAY 2007/01/25 YP_749275.1 372476 PG9822D PG9822D
2ooj X-RAY 2007/01/25 NP_717203.1 372361 PG9878A PG9878A
3c3p X-RAY 2008/01/28 NP_951602.1 372382 PG9890A PG9890A
2rdc X-RAY 2007/09/21 NP_951123.1 372393 PG9895A PG9895A
2p8j X-RAY 2007/03/22 NP_349143.1 372432 PG9905A PG9905A
2qjw X-RAY 2007/07/09 NP_636912.1 372467 PG9920A PG9920A
2qs7 X-RAY 2007/07/30 NP_342590.1 372180 PG9933A PG9933A
2q03 X-RAY 2007/05/18 YP_563039.1 372600 PG9969A PG9969A
2pyq X-RAY 2007/05/16 YP_512017.1 373487 PH10062D PH10062D jann_22dec04_Contig27_revised_gene2845
2pv4 X-RAY 2007/05/09 YP_928494.1 373751 PH10070D PH10070D sama_14oct04_Contig57_revised_gene1570
2pg4 X-RAY 2007/04/06 NP_147569.1 373551 PH10071A PH10071A gi|14601043|ref|NP_147569.1| hypothetical protein [Aeropyrum pernix]
3bjq X-RAY 2007/12/04 NP_890161.1 373379 PH10216A PH10216A phage-related protein
3eqx X-RAY 2008/10/01 NP_719793.1 376495 PJ02661S PJ02661S PJ02661S
3b9t X-RAY 2007/11/06 YP_546212.1 374794 PJ03069C PJ03069C Predicted acetamidase/formamidase
2q9r X-RAY 2007/06/13 YP_001051499.1 374572 PJ04222C PJ04222C sbal_17sep04_Contig169_revised_gene571
2qe6 X-RAY 2007/06/22 YP_290923.1 375255 PJ04672A PJ04672A PJ04672A
2pyx X-RAY 2007/05/16 YP_750003.1 374311 PJ04820A PJ04820A sfri_16aug04_Contig89_revised_gene3467
2q7s X-RAY 2007/06/07 YP_297560.1 374214 PJ05013D PJ05013D gi|73543040|ref|YP_297560.1| N-formylglutamate amidohydrolase [Ralstonia eutropha JMP134]
3bww X-RAY 2008/01/10 HSOM_08NOV04_CONTIG98_REVISED_GENE911 374865 PJ05114C PJ05114C Protein of unknown function (DUF692/COG3220) has some similarity to endonuclease IV.
2qe9 X-RAY 2007/06/25 YP_054576.1 374687 PJ05163B PJ05163B gi|50812211|ref|YP_054576.1| hypothetical protein BSU10800 [Bacillus subtilis subsp. subtilis str. 168]
3di5 X-RAY 2008/06/19 NP_980948.1 374604 PJ05163D PJ05163D gi|42783701|ref|NP_980948.1| hypothetical protein BCE4655 [Bacillus cereus ATCC 10987]
3chv X-RAY 2008/03/10 YP_164873.1 374753 PJ05853H PJ05853H This protein, YP_164873.1(PJ05843H), is from Silicibacter Pomeroyi with the length of 285 residues. A sequence search of PJ05843H against the PFAM database reveals that this target is a prokaryotic protein with unknown function (PF05853) (e-value: 6.2e-73). Additionally, this protein shares sequence similarity with COG3246: Uncharacterized conserved protein.
It has a TIM barrel fold and as such shares structural similarity with many proteins. Of structures solved to date (March 5, 2008), this protein seems to be the most similar (sequence similarity from ffas score -96.700, from a structurally superimposition from VAST: RMSD: 1.6 A, 30.3% sequence identity, with 264 residues aligned) to 3-Keto-5-Aminohexanoate Cleavage Enzyme (Yp_293392.1) from Ralstonia Eutropha Jmp134 (PDB code:3c6c which also has a TOPSAN page). Additionally this protein is a structural homolog to D-Ribulose 5-Phosphate 3-Epimerase (PDB ID: 1TQX) which has a conserved active site. Based on the results of calculations of surface interaction, the biomolecule of this protein should be a dimer.
2qtp X-RAY 2007/08/02 YP_166079.1 374584 PJ06684A PJ06684A gi|56695728|ref|YP_166079.1| hypothetical protein SPO0826 [Silicibacter pomeroyi DSS-3]
2re3 X-RAY 2007/09/25 YP_165412.1 374660 PJ06938A PJ06938A gi|56695065|ref|YP_165412.1| hypothetical protein SPO0140 [Silicibacter pomeroyi DSS-3]
2pw4 X-RAY 2007/05/10 YP_510353.1 374450 PJ07336D PJ07336D jann_22dec04_Contig25_revised_gene2122
3dka X-RAY 2008/06/24 NP_389123.1 389728 PK14417A PK14417A gi|16078306|ref|NP_389123.1| yjoA [Bacillus subtilis]
3dl1 X-RAY 2008/06/26 YP_001336084.1 388889 PK5307B PK5307B gi|152970975|ref|YP_001336084.1| hypothetical protein KPN_02432 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
3egr X-RAY 2008/09/11 YP_297411.1 389767 PK6406E PK6406E Phenylacetate-CoA oxygenase subunit PaaB
3f7c X-RAY 2008/11/07 YP_958225.1 394855 PS04222 PS04222 Protein of unknown function (DUF416). It is similar to yjaG from E. coli.
3djm X-RAY 2008/06/23 YP_001042567.1 376596 PS04248 PS04248 Protein of unknown function (DUF427/Pfam04248/COG2343) with structural similarity to tandem methionine sulfoxide reductase domains of the pilB protein (PDB code 1L1D) and to the C-terminal regulatory domain of human RIG-I (PDB code 2QFD).
3e11 X-RAY 2008/08/01 YP_873820.1 376525 PS06262 PS06262 Predicted zincin-like metalloprotease.
3c8w X-RAY 2008/02/13 YP_094708.1 376561 PS06314 PS06314 Acetoacetate decarboxylase (ADC)
3fa5 X-RAY 2008/11/14 YP_917261.1 378383 PT05853A PT05853A Protein of unknown function (DUF849).
3cmb X-RAY 2008/03/21 YP_001047042.1 378367 PT06314A PT06314A PT06314A _0000.0702158_ gi|126179077|ref|YP_001047042.1| hypothetical protein Memar_1128 [Methanoculleus marisnigri JR1]
3e8s X-RAY 2008/08/20 NP_744700.1 381657 PU4030C PU4030C gi|26989275|ref|NP_744700.1| hypothetical protein PP2555 [Pseudomonas putida KT2440]
3e98 X-RAY 2008/08/21 NP_253966.1 381648 PU6302B PU6302B gi|15600472|ref|NP_253966.1| conserved hypothetical protein [Pseudomonas aeruginosa PA01]
3byq X-RAY 2008/01/16 NP_889209.1 381697 PU6314B PU6314B Protein of unknown function (DUF1185). The protein structure of another member of the same family was deposited with PDB code 2qtp. According to the annotation of similar protein (YP_333612.1), it can be a peptide synthase.
3e02 X-RAY 2008/07/30 YP_555544.1 381354 PU6423C PU6423C Protein of unknown function (DUF849).
3e49 X-RAY 2008/08/11 YP_556190.1 381357 PU6423E PU6423E gi|91780983|ref|YP_556190.1| hypothetical protein Bxe_C0966 [Burkholderia xenovorans LB400]
3c6c X-RAY 2008/02/04 YP_293392.1 381418 PU6423S PU6423S 3-keto-5-aminohexanoate cleavage enzyme
3c8l X-RAY 2008/02/12 NPUN_22DEC03_CONTIG1_REVISED_GENENPR1471 381788 PU8365B PU8365B FtsZ-like protein of unknown function.
2qcv X-RAY 2007/06/19 NP_243185.1 375195 RK10652A RK10652A gi|15614882|ref|NP_243185.1| myo-inositol catabolism [Bacillus halodurans]
2qhp X-RAY 2007/07/02 NP_810670.1 375200 RK10654A RK10654A gi|29347167|ref|NP_810670.1| fructokinase [Bacteroides thetaiotaomicron VPI-5482]
2r3e X-RAY 2007/08/29 NP_815490.1 375213 RK10657A RK10657A gi|29376336|ref|NP_815490.1| YjeF-related protein [Enterococcus faecalis V583]
2r3b X-RAY 2007/08/29 NP_815490.1 375213 RK10657A RK10657A gi|29376336|ref|NP_815490.1| YjeF-related protein [Enterococcus faecalis V583]
3dzv X-RAY 2008/07/30 NP_816404.1 375214 RK10658A RK10658A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase (EC 2.7.1.50).
2idy NMR 2006/09/15 29837497 355891 SARS024 SARS024
2gri NMR 2006/04/24 29837497 355891 SARS024 SARS024
1ysy NMR 2005/02/09 29837500 355937 SARS070 SARS070
2acf X-RAY 2005/07/18 29837497 367631 SARS166 SARS166 gi|29837497|ref|NP_828862.1| putative coronavirus nsp1 [SARS coronavirus]
2gdt NMR 2006/03/17 NP_828860.2 367632 SARS167 SARS167 gi|34555774|ref|NP_828860.2| nsp1-pp1a/pp1ab [SARS coronavirus]
2hsx NMR 2006/07/24 NP_828860.2 367632 SARS167 SARS167 gi|34555774|ref|NP_828860.2| nsp1-pp1a/pp1ab [SARS coronavirus]
2k87 NMR 2008/09/02 NP_828850.1 396981 SARS168 SARS168 gi|29836495|ref|NP_828850.1| orf1a polyprotein (pp1a) [SARS coronavirus]
2kaf NMR 2008/11/05 NP_828850.1 399745 SARS169 SARS169 gi|29836495|ref|NP_828850.1| orf1a polyprotein (pp1a) [SARS coronavirus]
2raa X-RAY 2007/09/14 TM0015 281896 TM0015 TM0015 Pyruvate synthase subunit PORC (EC 1.2.7.1) (Pyruvate oxidoreductase
gamma chain) (POR) (Pyruvic-ferredoxin oxidoreductase gamma subunit).
1o51 X-RAY 2003/08/01 TM0021 281902 TM0021 TM0021 PII like protein glnB
1j5s X-RAY 2002/07/02 TM0064 281945 TM0064 TM0064 Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase) (Uronic
isomerase).
1vlw X-RAY 2004/08/18 TM0066 281947 TM0066 TM0066 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) / 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16)
2afb X-RAY 2005/07/25 TM0067 281948 TM0067 TM0067 2-dehydro-3- deoxygluconokinase (EC 2.7.1.45)
1vlq X-RAY 2004/08/09 TM0077 281958 TM0077 TM0077 Acetyl xylan esterase.
2f4l X-RAY 2005/11/23 TM0119 282000 TM0119 TM0119 Acetamidase, putative.
1j5t X-RAY 2002/07/03 TM0140 282020 TM0140 TM0140 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS).
1vp2 X-RAY 2004/10/06 TM0159 282039 TM0159 TM0159 Putative Xanthosine triphosphate pyrophosphatase (EC 3.6.1.-)/HAM1 protein homolog.
1sj5 X-RAY 2004/03/02 TM0160 358348 TM0160 TM0160 Predicted protein related to wound inducive proteins in plants
1vjl X-RAY 2004/03/10 TM0160 282040 TM0160 TM0160 Predicted protein related to wound inducive proteins in plants
2ftz X-RAY 2006/01/25 TM0161 282041 TM0161 TM0161 Geranyltranstransferase (EC 2.5.1.10)
1o5z X-RAY 2003/10/10 TM0166 282046 TM0166 TM0166 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17)
1vku X-RAY 2004/06/18 TM0175 282055 TM0175 TM0175 Acyl carrier protein (ACP).
2etv X-RAY 2005/10/27 TM0189 358402 TM0189 TM0189 IRON(III) ABC transporter, periplasmic iron-binding protein, putative.
1vjn X-RAY 2004/03/11 TM0207 282087 TM0207 TM0207 Zn-dependent hydrolase of metallo-beta-lactamase superfamily
1zko X-RAY 2005/05/03 TM0212 282092 TM0212 TM0212 Glycine cleavage system H protein
2b33 X-RAY 2005/09/19 TM0215 282095 TM0215 TM0215 Protein synthesis inhibitor, putative.
1j5w X-RAY 2002/07/05 TM0216 282096 TM0216 TM0216 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
1j6u X-RAY 2002/08/29 TM0231 282110 TM0231 TM0231 UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-
acetylmuramoyl-L-alanine synthetase).
3dcz X-RAY 2008/06/04 TM0246 358404 TM0246 TM0246 Putative RnfG subunit of electron transport complex.
1vpk X-RAY 2004/11/09 TM0262 282139 TM0262 TM0262 DNA polymerase III, beta subunit.
1j6r X-RAY 2002/07/10 TM0269 282146 TM0269 TM0269 Activation (AdoMet binding) domain of Methionine synthase (EC 2.1.1.13)
1o20 X-RAY 2003/02/12 TM0293 282169 TM0293 TM0293 Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-
semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde
dehydrogenase) (GSA dehydrogenase).
1vpx X-RAY 2004/11/23 TM0295 282171 TM0295 TM0295 Transaldolase (EC 2.2.1.2).
1zh8 X-RAY 2005/04/22 TM0312 282188 TM0312 TM0312 Oxidoreductase (EC 1.1.1.-)
1vqt X-RAY 2005/01/04 TM0332 282207 TM0332 TM0332 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase)
(OMPDCase) (OMPdecase).
1vr6 X-RAY 2005/02/14 TM0343 282218 TM0343 TM0343 Phospho-2-dehydro-3-deoxyheptonate aldolase (EC 2.5.1.54) (DAHP synthase)
1z82 X-RAY 2005/03/29 TM0378 354146 TM0378 TM0378
1vk4 X-RAY 2004/04/26 TM0415 282288 TM0415 TM0415 Carbohydrate kinase, PfkB family
1kq3 X-RAY 2002/01/03 TM0423 282296 TM0423 TM0423 Glycerol dehydrogenase.
1vj0 X-RAY 2003/12/02 TM0436 282309 TM0436 TM0436 Alcohol dehydrogenase, zinc-containing.
1vl8 X-RAY 2004/07/14 TM0441 359776 TM0441 TM0441 Gluconate 5-dehydrogenase (EC 1.1.1.69)
1o4v X-RAY 2003/07/11 TM0446 282319 TM0446 TM0446 Phosphoribosylaminoimidazole carboxylase catalytic subunit
(EC 4.1.1.21) (AIR carboxylase) (AIRC).
1kq4 X-RAY 2002/01/03 TM0449 282322 TM0449 TM0449 Thy1-Complementing Protein
Thymidylate synthase thyX (EC 2.1.1.-) (TS) (TSase).
1vk8 X-RAY 2004/05/05 TM0486 282359 TM0486 TM0486 Protein with possible role in cell wall biogenesis
1wcj NMR 2004/11/17 TM0487 282360 TM0487 TM0487 Conserved PaaD-like protein of unknown function; possibly involved
with Fe-S cluster metabolism.
1uwd NMR 2004/02/03 TM0487 282360 TM0487 TM0487 Conserved PaaD-like protein of unknown function; possibly involved
with Fe-S cluster metabolism.
1vq1 X-RAY 2004/12/02 TM0488 282361 TM0488 TM0488 N5-glutamine methyltransferase, HemK(EC 2.1.1.-)
2g36 X-RAY 2006/02/17 TM0492 282365 TM0492 TM0492 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan--tRNA ligase)
(TrpRS).
1vk2 X-RAY 2004/04/16 TM0511 359753 TM0511 TM0511 Uracil-DNA glycosylase (EC 3.2.2.-)
1vl6 X-RAY 2004/07/13 TM0542 282415 TM0542 TM0542 NAD-dependent malic enzyme (EC 1.1.1.38)
1vpl X-RAY 2004/11/10 TM0544 282417 TM0544 TM0544 ABC transporter ATP-binding protein.
1vlc X-RAY 2004/07/20 TM0556 282429 TM0556 TM0556 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM dehydrogenase)
(IMDH) (3-IPM-DH).
2anu X-RAY 2005/08/11 TM0559 282432 TM0559 TM0559 Predicted metal-dependent phosphoesterase (PHP family)
2iub X-RAY 2006/06/01 TM0561 282434 TM0561 TM0561 Magnesium Mg(2+)/cobalt Co(2+) transport protein.
1vma X-RAY 2004/09/15 TM0570 282443 TM0570 TM0570 Cell division protein ftsY.
1vky X-RAY 2004/06/28 TM0574 282447 TM0574 TM0574 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
(Queuosine biosynthesis protein queA).
2q78 X-RAY 2007/06/06 TM0581 282454 TM0581 TM0581 Hypothetical protein TM0581.
1vmb X-RAY 2004/09/16 TM0603 282476 TM0603 TM0603 30S ribosomal protein S6.
1z9f X-RAY 2005/04/01 TM0604 282477 TM0604 TM0604 Single stranded DNA-binding protein, putative.
1o3u X-RAY 2003/03/28 TM0613 282486 TM0613 TM0613 Nucleotide binding domain (HEPN) of the two-protein nucleotidyl transferase complex
1vr7 X-RAY 2005/02/15 TM0655 282527 TM0655 TM0655 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC)
(SamDC) [Contains: S-adenosylmethionine decarboxylase beta chain; S-
adenosylmethionine decarboxylase alpha chain].
2amu X-RAY 2005/08/10 TM0658 282530 TM0658 TM0658 Putative superoxide reductase (EC 1.15.1.2) (SOR).
1o58 X-RAY 2003/08/20 TM0665 282537 TM0665 TM0665 Cysteine synthase.
1j6o X-RAY 2002/07/09 TM0667 282539 TM0667 TM0667 TatD-related deoxyribonuclease
1o6a X-RAY 2003/10/24 TM0680 356088 TM0680 TM0680 Flagellar motor switch protein fliY
2fzt X-RAY 2006/02/10 TM0693 360368 TM0693 TM0693 Hypothetical protein TM0693.
2g42 X-RAY 2006/02/21 TM0693 360368 TM0693 TM0693 Hypothetical protein TM0693.
1vrg X-RAY 2005/02/22 TM0716 282586 TM0716 TM0716 Acetyl-coenzyme A carboxyl transferase (EC 6.4.1.2) / Propionyl-coenzyme A carboxyl transferase (EC 6.4.1.3) / Biotin:Acyl-CoA transcarboxylase chain
1o5o X-RAY 2003/10/03 TM0721 282591 TM0721 TM0721 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase)
(UPRTase).
1vmj X-RAY 2004/09/30 TM0723 282593 TM0723 TM0723 Hypothetical protein TM0723.
1vl4 X-RAY 2004/07/09 TM0727 282597 TM0727 TM0727 PmbA protein
1vlh X-RAY 2004/07/23 TM0741 359843 TM0741 TM0741 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Pantetheine-
phosphate adenylyltransferase) (PPAT) (Dephospho-CoA
pyrophosphorylase).
1o54 X-RAY 2003/08/13 TM0748 282618 TM0748 TM0748 SAM-dependent O-methyltransferase
1vjt X-RAY 2004/03/22 TM0752 282622 TM0752 TM0752 alpha-glucuronidase (EC 3.2.1.139).
1vme X-RAY 2004/09/21 TM0755 282625 TM0755 TM0755 Flavoprotein
2gno X-RAY 2006/04/10 TM0771 360384 TM0771 TM0771 DNA polymerase III, gamma subunit-related protein.
2g0t X-RAY 2006/02/13 TM0796 282666 TM0796 TM0796 Hypothetical protein TM0796.
3bo9 X-RAY 2007/12/17 TM0800 282670 TM0800 TM0800 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)
1j5x X-RAY 2002/07/05 TM0813 282683 TM0813 TM0813 Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
1o12 X-RAY 2002/10/15 TM0814 282684 TM0814 TM0814 N-acetylglucosamine-6-phosphate deacetylase.
2eth X-RAY 2005/10/27 TM0816 282686 TM0816 TM0816 Transcriptional regulator, putative, MAR family.
1vlj X-RAY 2004/07/28 TM0820 282690 TM0820 TM0820 NADH-dependent butanol dehydrogenase A (EC 1.1.1.-)
2ajr X-RAY 2005/08/02 TM0828 282698 TM0828 TM0828 Possible 1-phosphofructokinase (EC 2.7.1.56)
3csw X-RAY 2008/04/10 TM0831 282701 TM0831 TM0831 Probable branched-chain amino acid aminotransferase (EC 2.6.1.42)
(BCAT).
2a6a X-RAY 2005/07/02 TM0874 282743 TM0874 TM0874 Glycoprotein endopeptidase
1o22 X-RAY 2003/02/15 TM0875 282744 TM0875 TM0875 Hypothetical protein TM0875.
2h2w X-RAY 2006/05/19 TM0881 359866 TM0881 TM0881 Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine O-
transsuccinylase) (HTS).
1vr9 X-RAY 2005/02/17 TM0892 282761 TM0892 TM0892 CBS domain protein/ACT domain protein
1ztc X-RAY 2005/05/26 TM0894 359759 TM0894 TM0894 Hypothetical protein TM0894.
2etj X-RAY 2005/10/27 TM0915 282784 TM0915 TM0915 Ribonuclease HII (EC 3.1.26.4) (RNase HII).
1vla X-RAY 2004/07/15 TM0919 282788 TM0919 TM0919 Hydroperoxide resistance protein OsmC
1o2d X-RAY 2003/02/27 TM0920 375013 TM0920 TM0920 Alcohol dehydrogenase, iron-containing.
2ax3 X-RAY 2005/09/02 TM0922 282791 TM0922 TM0922 Hypothetical protein TM0922.
1o50 X-RAY 2003/07/31 TM0935 282804 TM0935 TM0935 CBS domain-containing predicted protein
1j6p X-RAY 2002/07/09 TM0936 282805 TM0936 TM0936 Metal-dependent hydrolase of cytosinedemaniase/chlorohydrolase family.
2f4i X-RAY 2005/11/23 TM0957 358444 TM0957 TM0957 Hypothetical protein TM0957.
1vm7 X-RAY 2004/09/08 TM0960 282829 TM0960 TM0960 Ribokinase.
2etd X-RAY 2005/10/27 TM0961 358514 TM0961 TM0961 LEMA protein.
1rhx NMR 2003/11/14 TM0979 282848 TM0979 TM0979 Conserved DsrH-like protein of unknown function; possibly involved with sulfur metabolism.
1vp5 X-RAY 2004/10/13 TM1009 282876 TM1009 TM1009 2,5-diketo-D-gluconic acid reductase (EC 1.1.1.274)
2f4p X-RAY 2005/11/23 TM1010 282877 TM1010 TM1010 Hypothetical protein TM1010.
2fcl X-RAY 2005/12/12 TM1012 282879 TM1012 TM1012 Hypothetical protein TM1012.
2ewr X-RAY 2005/11/05 TM1012 282879 TM1012 TM1012 Hypothetical protein TM1012.
1zkg X-RAY 2005/05/02 TM1030 282897 TM1030 TM1030 Transcriptional regulator, TETR family.
2a0n X-RAY 2005/06/16 TM1036 282903 TM1036 TM1036 Imidazole glycerol phosphate synthase subunit hisF (EC 4.1.3.-) (IGP
synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase
subunit hisF) (IGPS subunit hisF).
2f8j X-RAY 2005/12/02 TM1040 359801 TM1040 TM1040 Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-
phosphate transaminase).
2fvg X-RAY 2006/01/30 TM1049 282916 TM1049 TM1049 Endoglucanase.
1o5j X-RAY 2003/09/19 TM1056 282923 TM1056 TM1056 Periplasmic divalent cation tolerance protein.
1o1x X-RAY 2003/02/12 TM1080 282947 TM1080 TM1080 Ribose 5-phosphate isomerase (EC 5.3.1.6)
2ka5 NMR 2008/10/30 TM1081 282948 TM1081 TM1081 Putative anti-sigma factor antagonist TM1081.
3f43 X-RAY 2008/10/31 TM1081 282948 TM1081 TM1081 Putative anti-sigma factor antagonist TM1081.
1j5u X-RAY 2002/07/03 TM1083 282950 TM1083 TM1083 Archease, possible chaperon
2g1u X-RAY 2006/02/14 TM1088A 358957 TM1088A TM1088A
1vlv X-RAY 2004/08/16 TM1097 282963 TM1097 TM1097 Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase).
1o0w X-RAY 2002/09/13 TM1102 282968 TM1102 TM1102 Ribonuclease III (EC 3.1.26.3) (RNase III).
2k9z NMR 2008/10/28 TM1112 282978 TM1112 TM1112 Predicted enzyme of the cupin superfamily
1o5u X-RAY 2003/10/06 TM1112 282978 TM1112 TM1112 Predicted enzyme of the cupin superfamily
1vlg X-RAY 2004/07/23 TM1128 282994 TM1128 TM1128 Ferritin.
1vp4 X-RAY 2004/10/08 TM1131 282997 TM1131 TM1131 Aminotransferase, putative.
1vl1 X-RAY 2004/06/30 TM1154 283020 TM1154 TM1154 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL).
1o1y X-RAY 2003/02/12 TM1158 283024 TM1158 TM1158 Glutamine amidotransferase
1o5i X-RAY 2003/09/17 TM1169 283034 TM1169 TM1169 3-oxoacyl-(acyl carrier protein) reductase.
1o5l X-RAY 2003/09/23 TM1171 283036 TM1171 TM1171 Transcriptional regulator, CrP family.
1vmd X-RAY 2004/09/20 TM1185 283050 TM1185 TM1185 Methylglyoxal synthase (EC 4.2.3.3) (MGS).
1zy9 X-RAY 2005/06/09 TM1192 359818 TM1192 TM1192 Alpha-galactosidase (EC 3.2.1.22) (Melibiase).
1vr5 X-RAY 2005/02/11 TM1223 358463 TM1223 TM1223 Oligopeptide ABC transporter, periplasmic oligopeptide-binding
protein.
2hoe X-RAY 2006/07/14 TM1224 359804 TM1224 TM1224 N-acetylglucosamine kinase (EC 2.7.1.59) / predicted N-acetylglucosamine repressor
1vkd X-RAY 2004/05/12 TM1225 283090 TM1225 TM1225 Predicted glycosylase
1vq3 X-RAY 2004/12/15 TM1244 283109 TM1244 TM1244 Phosphoribosylformylglycinamidine synthase, purS subunit (EC 6.3.5.3)
1vk3 X-RAY 2004/04/23 TM1246 283111 TM1246 TM1246 Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3) (FGAM
synthase II).
1zcz X-RAY 2005/04/13 TM1249 360132 TM1249 TM1249 Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) / IMP cyclohydrolase (EC 3.5.4.10)
1vkz X-RAY 2004/06/29 TM1250 359807 TM1250 TM1250 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide
ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase).
1o4s X-RAY 2003/06/26 TM1255 283120 TM1255 TM1255 Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A) (AspAT).
2gi3 X-RAY 2006/03/28 TM1272 283137 TM1272 TM1272 Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-) (Glu-ADT
subunit A).
1o4t X-RAY 2003/07/03 TM1287 283151 TM1287 TM1287 Oxalate decarboxylase(EC 4.1.1.2 )
1rdu NMR 2003/11/06 TM1290 283154 TM1290 TM1290 Probable NifB protein, involved in FeMo-Co biosynthesis
1vlm X-RAY 2004/08/04 TM1293 283157 TM1293 TM1293 SAM-dependent methyltransferase, possible histamine N-methyltransferase
1vrd X-RAY 2005/02/22 TM1347 283208 TM1347 TM1347 Inosine-5'-monophosphate dehydrogenase.
2o5r X-RAY 2006/12/06 TM1351 283212 TM1351 TM1351 Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA ligase 1)
(GluRS 1).
1zx8 X-RAY 2005/06/07 TM1367 283228 TM1367 TM1367 Hypothetical protein TM1367.
2ka0 NMR 2008/10/27 TM1367 283228 TM1367 TM1367 Hypothetical protein TM1367.
1z85 X-RAY 2005/03/29 TM1380 359772 TM1380 TM1380 Hypothetical protein TM1380.
2q8n X-RAY 2007/06/11 TM1385 283246 TM1385 TM1385 Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI) (Phosphoglucose
isomerase) (PGI) (Phosphohexose isomerase) (PHI).
2grj X-RAY 2006/04/24 TM1387 283248 TM1387 TM1387 Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase).
2avn X-RAY 2005/08/30 TM1389 283250 TM1389 TM1389 Ubiquinone/menaquinone biosynthesis methyltransferase-related protein.
1vpa X-RAY 2004/10/14 TM1393 283254 TM1393 TM1393 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)
1vq0 X-RAY 2004/11/30 TM1394 283255 TM1394 TM1394 33 kDa chaperonin (Heat shock protein 33 homolog) (HSP33).
2aam X-RAY 2005/07/13 TM1410 358470 TM1410 TM1410 Hypothetical protein DR0705.
3cin X-RAY 2008/03/11 TM1419 283279 TM1419 TM1419 Myo-inositol-1-phosphate synthase
1vkf X-RAY 2004/05/13 TM1436 283296 TM1436 TM1436 Glycerol uptake operon antiterminator-related protein.
1sbo NMR 2004/02/10 TM1442 283301 TM1442 TM1442 Putative anti-sigma factor antagonist TM1442.
1t6r NMR 2004/05/07 TM1442 283301 TM1442 TM1442 Putative anti-sigma factor antagonist TM1442.
1vj2 X-RAY 2003/12/03 TM1459 283317 TM1459 TM1459 Putative carbohydrate binding protein
1vkm X-RAY 2004/06/09 TM1464 283322 TM1464 TM1464 Conserved hypothetical protein possibly involved?in carbohydrate metabolism
1vpv X-RAY 2004/11/18 TM1468 283326 TM1468 TM1468 UPF0230 protein TM1468.
1o0x X-RAY 2002/09/13 TM1478 283335 TM1478 TM1478 Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase M).
1r73 NMR 2003/10/17 TM1492 283349 TM1492 TM1492 50S ribosomal protein L29.
1vk9 X-RAY 2004/05/06 TM1506 283363 TM1506 TM1506 Hypothetical protein TM1506.
1vm6 X-RAY 2004/09/03 TM1520 283377 TM1520 TM1520 Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR).
1o5k X-RAY 2003/09/22 TM1521 283378 TM1521 TM1521 Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS).
1vjx X-RAY 2004/04/01 TM1526 283383 TM1526 TM1526 Putative ferritin-like diiron-carboxylate protein
1vrm X-RAY 2005/03/10 TM1553 358474 TM1553 TM1553 Hypothetical protein TM1553.
1o0y X-RAY 2002/09/13 TM1559 283416 TM1559 TM1559 Deoxyribose-phosphate aldolase (EC 4.1.2.4) (Phosphodeoxyriboaldolase)
(Deoxyriboaldolase) (DERA).
1o5h X-RAY 2003/09/17 TM1560 283417 TM1560 TM1560 Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)
2ash X-RAY 2005/08/23 TM1561 283418 TM1561 TM1561 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (tRNA-guanine
transglycosylase) (Guanine insertion enzyme).
2b8n X-RAY 2005/10/07 TM1585 283442 TM1585 TM1585 Glycerate kinase (EC 2.7.1.31)
1vkw X-RAY 2004/06/24 TM1586 359768 TM1586 TM1586 Putative Nitroreductase (EC 1.-.-.-)
1vmk X-RAY 2004/09/30 TM1596 283453 TM1596 TM1596 Purine nucleoside phosphorylase.
1j5y X-RAY 2002/07/05 TM1602 283459 TM1602 TM1602 Transcriptional regulator, biotin repressor family.
2r9v X-RAY 2007/09/13 TM1612 283469 TM1612 TM1612 ATP synthase alpha chain (EC 3.6.3.14)
1vke X-RAY 2004/05/13 TM1620 359877 TM1620 TM1620 Carboxymuconolactone decarboxylase family protein possibly involved in antioxidative response
1o1z X-RAY 2003/02/12 TM1621 283478 TM1621 TM1621 Glycerophosphodiester phosphodiesterase (GDPD) (TM1621).
1vr8 X-RAY 2005/02/16 TM1622 358480 TM1622 TM1622 GTP binding regulator
1vpq X-RAY 2004/11/16 TM1631 283488 TM1631 TM1631 Hypothetical protein TM1631.
2q8u X-RAY 2007/06/11 TM1635 372975 TM1635 TM1635 Exonuclease, putative.
1j5p X-RAY 2002/06/27 TM1643 283500 TM1643 TM1643 Aspartate dehydrogenase [same functional role as] (EC 1.4.3.16)
1o4u X-RAY 2003/07/09 TM1645 283502 TM1645 TM1645 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
1lme X-RAY 2002/05/01 TM1661 283518 TM1661 TM1661 Peptide deformylase (EC 3.5.1.88) (PDF) (Polypeptide deformylase).
2gb3 X-RAY 2006/03/09 TM1698 283555 TM1698 TM1698 Aspartate aminotransferase.
1zup X-RAY 2005/05/31 TM1739 283594 TM1739 TM1739 Hypothetical protein TM1739 (RNaseH fold).
1vjr X-RAY 2004/03/22 TM1742 283597 TM1742 TM1742 4-nitrophenylphosphatase (EC 3.1.3.41)
2fm1 X-RAY 2006/01/06 TM1744 283599 TM1744 TM1744 L-ALLO-threonine aldolase.
1vjz X-RAY 2004/04/08 TM1752 359798 TM1752 TM1752 Endoglucanase.
3do6 X-RAY 2008/07/03 TM1766 283620 TM1766 TM1766 Formate--tetrahydrofolate ligase.
1vl2 X-RAY 2004/07/08 TM1780 283634 TM1780 TM1780 Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate
ligase).
1vkn X-RAY 2004/06/11 TM1782 283635 TM1782 TM1782 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) (AGPR) (N-
acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase).
2ord X-RAY 2007/02/02 TM1785 283638 TM1785 TM1785 Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT).
1o13 X-RAY 2002/10/15 TM1816 283669 TM1816 TM1816 Probable NifB protein, involved in FeMo-Co biosynthesis
1t3v NMR 2004/04/27 TM1816 283669 TM1816 TM1816 Probable NifB protein, involved in FeMo-Co biosynthesis
2hxv X-RAY 2006/08/04 TM1828 283681 TM1828 TM1828 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-
(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
1vkh X-RAY 2004/05/20 YDR428C 354901 YDR428C YDR428C D9461.15P.
2g80 X-RAY 2006/03/01 YEL038W 354980 YEL038W MY4083A UTR4 protein (Unknown transcript 4 protein).
1vjv X-RAY 2004/03/29 YFR010W 355004 YFR010W YFR010W Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15) (Ubiquitin
thiolesterase 6) (Ubiquitin-specific processing protease 6)
(Deubiquitinating enzyme 6).
1o59 X-RAY 2003/08/22 YIR029W 355059 YIR029W YIR029W Allantoicase (EC 3.5.3.4) (Allantoate amidinohydrolase).
1vlp X-RAY 2004/08/06 YOR209C 354135 YOR209C YOR209C Probable nicotinate phosphoribosyltransferase (EC 2.4.2.11) (NAPRTase).
1vlu X-RAY 2004/08/16 YOR323C 354122 YOR323C YOR323C Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5- semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase).
1s4y X-RAY 2004/01/19 114727 356547 114727:124279 114727:124279 none
1s4y X-RAY 2004/01/19 124279 356547 124279:114727 114727:124279 none
2b8m X-RAY 2005/10/07 1499583 359364 1499583 CL6084A
3d7i X-RAY 2008/05/21 1591455 381877 1591455 XB5681A Carboxymuconolactone decarboxylase family protein possibly involved in oxygen detoxification.
2gb5 X-RAY 2006/03/09 1790429 355840 1790429 1790429 NADH pyrophosphatase (EC 3.6.1.-).
1vk6 X-RAY 2004/04/30 1790429 355840 1790429 1790429 NADH pyrophosphatase (EC 3.6.1.-).
2r11 X-RAY 2007/08/21 2632844 360559 2632844 CL4101A
3bem X-RAY 2007/11/19 2632848 381891 2632848 XB5617A Putative NAD(P)H nitroreductase ydfN (EC 1.-.-.-) . Trp47 in protein with similar structure (PDB code: 1nox) is important for enzyme catalysis and substrate binding and corresponds to Phe42 in ydfN.
2fea X-RAY 2005/12/15 2633731 359084 2633731 CL5896A
2q83 X-RAY 2007/06/08 2635576 362376 2635576 CL5902A
1vli X-RAY 2004/07/27 2636322 355716 2636322 MB3402A Spore coat polysaccharide biosynthesis protein spsE.
1vrb X-RAY 2005/02/18 2636534 354163 2636534 2636534 Putative asparaginyl hydroxylase
2h0v X-RAY 2006/05/15 2636545 367501 2636545 CL6293A
2gd9 X-RAY 2006/03/15 2636623 359096 2636623 CL5846B
2qg3 X-RAY 2007/06/28 2648472 355678 2648472 MB4299A Hypothetical protein AF2059.
1vll X-RAY 2004/08/03 2648890 354281 2648890 2648890 Ornithine cyclodeaminase (ARCB).
3bn8 X-RAY 2007/12/13 2649030 381893 2649030 XB5653A Putative sterol carrier protein 2 (NP_070363) has structural similarity to proteins with PDB codes: 1ikt, 2cg3 (C-terminal domain), 1c44, 1pz4, and 1wfr.
2ffj X-RAY 2005/12/19 NP_069933.1 360250 2649480 TB0176B Hypothetical protein AF1104.
2isb X-RAY 2006/10/17 NP_069927.1 356698 2649494 TB0541B Fumarase (FUM-1).
1o4w X-RAY 2003/07/16 2650039 354418 2650039 2650039 Hypothetical protein AF0591.
1vp8 X-RAY 2004/10/14 NP_068944.1 356685 2650543 TB0885A Hypothetical protein AF0103.
2g8l X-RAY 2006/03/02 3258004 357888 3258004 TB0176C Hypothetical protein PH1575.
2fyx X-RAY 2006/02/08 6457846 357203 6457846 TB0048D Transposase, putative.
2g40 X-RAY 2006/02/21 6459694 357226 6459694 TB5053K Hypothetical protein DR1909.
1vqr X-RAY 2004/12/17 6967725 356952 6967725 TB5129A Hypothetical protein Cj0248.
2f46 X-RAY 2005/11/22 7380613 367330 7380613 CL6101A
1vpz X-RAY 2004/11/24 NP_249596.1 357779 9946807 TB0251L Carbon storage regulator homolog.
2f1l X-RAY 2005/11/14 NP_252433.1 357814 9949912 TB1568L 16S rRNA processing protein rimM.
2ii1 X-RAY 2006/09/27 10172637 356726 10172637 TB0119B Acetamidase.
2ftr X-RAY 2006/01/24 10172812 359048 10172812 CL5868A
2hti X-RAY 2006/07/25 10173191 359054 10173191 CL5442A
2ah6 X-RAY 2005/07/27 10174212 354264 10174212 MB2097A Hypothetical protein BH1595.
2h56 X-RAY 2006/05/25 10174367 358704 10174367 XB5566A DNA-3-methyladenine glycosidase.
1vl5 X-RAY 2004/07/09 10174951 356107 10174951 10174951 Hypothetical protein BH2331.
2oa2 X-RAY 2006/12/14 10175341 371834 10175341 CL5884A
2gfg X-RAY 2006/03/21 10175472 359067 10175472 CL5885A
1vra X-RAY 2005/02/17 10175521 356780 10175521 TB1783C Arginine biosynthesis bifunctional protein argJ [Includes: Glutamate
N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase)
(Ornithine transacetylase) (OATase); Amino-acid acetyltransferase
(EC 2.3.1.1) (N-acetylglutamate synthase) (AGS)] [Contains: Arginine
biosynthesis bifunctional protein argJ alpha chain; Arginine
biosynthesis bifunctional protein argJ beta chain].
2b4a X-RAY 2005/09/23 10175646 358875 10175646 XB5737A BH3024 protein.
1vmf X-RAY 2004/09/23 10176122 356786 10176122 TB0723G Hypothetical protein BH3498.
2aj7 X-RAY 2005/08/01 10176242 360242 10176242 TB5103A Hypothetical protein BH3618.
2f22 X-RAY 2005/11/15 10176612 359078 10176612 CL5891A
3bf5 X-RAY 2007/11/20 10640157 381882 10640157 XB5612A Putative ribokinase.
2fur X-RAY 2006/01/27 10640715 359680 10640715 CL6252A
2pwn X-RAY 2007/05/11 13277653 354543 13277653 MM2105A BET3 homolog.
1vjf X-RAY 2004/02/11 13421216 355823 13421216 13421216 DNA-binding protein, putative.
2rh0 X-RAY 2007/10/05 13542905 380417 13542905 13542905 2700047N05Rik protein (RIKEN cDNA 2700047N05 gene).
1vr3 X-RAY 2005/01/28 13543033 354741 13543033 MM4387A Acireductone dioxygenase
2fna X-RAY 2006/01/10 13814777 359645 13814777 CL1011C
2gf6 X-RAY 2006/03/21 13815598 359654 13815598 CL4612A
1vph X-RAY 2004/11/03 13815834 358101 13815834 TB0723W Hypothetical protein SSO2532.
1vmg X-RAY 2004/09/24 13816655 358109 13816655 TB0913Q Hypothetical protein SSO12199.
1vkb X-RAY 2004/05/07 13879369 354528 13879369 13879369 conserved mouse enzyme
1vqz X-RAY 2005/01/21 NP_345629.1 358040 14972639 TB3399M Lipoate-protein ligase, putative.
1vmh X-RAY 2004/09/24 15023806 357074 15023806 TB0723K Uncharacterized conserved protein YjbQ/UPF0047 family, ortholog
yugU B.subtilis.
1vl0 X-RAY 2004/06/30 15025322 355809 15025322 15025322 DTDP-4-dehydrorhamnose reductase, rfbD ortholog.
1vr0 X-RAY 2005/01/26 15026306 357129 15026306 TB0797A Probable 2-phosphosulfolactate phosphatase (EC 3.1.3.71).
1vkk X-RAY 2004/05/27 15079298 354641 15079298 15079298 Glia maturation factor-gamma (0610039G16Rik protein) (2310057N07Rik
protein) (Glia maturation factor, gamma).
2ghs X-RAY 2006/03/27 15155668 355654 15155668 MB2013A Calcium-binding protein, regucalcin.
2gvh X-RAY 2006/05/02 15159470 354259 15159470 MB3864A Acyl-CoA hydrolase.
1vki X-RAY 2004/05/24 15159614 354222 15159614 15159614 Hypothetical protein Atu3699.
2fno X-RAY 2006/01/11 15162326 354428 15162326 15162326 Putative glutathione S-transferase
2qmq X-RAY 2007/07/16 15277975 358981 15277975 MM2092B gi|15277975|gb|BC012963.1|BC012963 Mus musculus, Similar to N-myc downstream regulated 2, clone MGC:13746 IMAGE:4211421, mRNA, complete cds
2f8l X-RAY 2005/12/02 16411011 359352 16411011 CL6076A
2g0w X-RAY 2006/02/13 16411704 358685 16411704 XB5547A Lmo2234 protein.
2i6g X-RAY 2006/08/28 16420133 359588 16420133 CL4127A
2a3n X-RAY 2005/06/25 16423107 358650 16423107 XB5512A Putative glucosamine-fructose-6-phosphate aminotransferase.
1vlr X-RAY 2004/08/10 16740816 354778 16740816 16740816 1700001E16Rik protein (RIKEN cDNA 1700001E16 gene) (Histidine triad
protein member 5).
1vm8 X-RAY 2004/09/10 16741099 354660 16741099 16741099 Hypothetical 58.6 kDa protein.
2fmu X-RAY 2006/01/09 16924205 358966 16924205 MM2294A Tat-interacting protein 30 kDa (HIV-1 tat interactive protein 2, 30
kDa homolog) (Human).
1vjo X-RAY 2004/03/16 17130350 354073 17130350 17130350 Alanine--glyoxylate aminotransferase.
1vqu X-RAY 2005/01/05 17130499 354074 17130499 17130499 Anthranilate phosphoribosyltransferase 2 (EC 2.4.2.18).
1vl7 X-RAY 2004/07/13 17134165 356118 17134165 17134165 Hypothetical protein Alr5027.
1z8h X-RAY 2005/04/11 17135349 354318 17135349 17135349 Putative lipase from the G-D-S-L family
1vjg X-RAY 2004/02/19 17135349 354318 17135349 17135349 Putative lipase from the G-D-S-L family
2afd NMR 2005/07/25 17135470 354432 17135470 17135470 Putative fatty acid synthase acyl carrier protein
2afe NMR 2005/07/25 17135470 354432 17135470 17135470 Putative fatty acid synthase acyl carrier protein
2gfh X-RAY 2006/03/21 17391249 354784 17391249 17391249 Protein C20orf147 homolog.
2f6r X-RAY 2005/11/29 18044849 354593 18044849 MM1387A Bifunctional coenzyme A synthase (CoA synthase) [Includes:
Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Pantetheine-
phosphate adenylyltransferase) (PPAT) (Dephospho-CoA
pyrophosphorylase); Dephospho-CoA kinase (EC 2.7.1.24) (DPCK)
(Dephosphocoenzyme A kinase) (DPCOAK)].
1vj1 X-RAY 2003/12/03 18204011 354739 18204011 18204011 NADPH dependent oxidoreductase.
2gb4 X-RAY 2006/03/09 18204406 354534 18204406 MM4090A Thiopurine methyltransferase.
1zbt X-RAY 2005/04/08 SMU.1085 358002 24377463 TB1363E Peptide chain release factor 1 (RF-1).
1vpb X-RAY 2004/10/15 BT3649 356879 29340964 TB5115A Putative modulator of DNA gyrase.
2q14 X-RAY 2007/05/23 BT4208 356887 29341526 TB1547G Phosphohydrolase.
1vpy X-RAY 2004/11/23 EF0366 357242 29342463 TB1631F Hypothetical protein.
1ztv X-RAY 2005/05/27 EF0366 357242 29342463 TB1631F Hypothetical protein.
2jzf NMR 2007/10/12 29837497 388820 29837497 SARS025 gi|29837497|ref|NP_828862.1| putative coronavirus nsp1 [SARS coronavirus]
2jze NMR 2008/01/04 29837497 391773 29837497 SARS025 gi|29837497|ref|NP_828862.1| putative coronavirus nsp1 [SARS coronavirus]
2rnk NMR 2008/01/11 29837497 388820 29837497 SARS025 gi|29837497|ref|NP_828862.1| putative coronavirus nsp1 [SARS coronavirus]
2jzd NMR 2008/01/04 29837497 391773 29837497 SARS025 gi|29837497|ref|NP_828862.1| putative coronavirus nsp1 [SARS coronavirus]
1vp7 X-RAY 2004/10/14 NP_881400.1 356938 33563829 TB1769D Exodeoxyribonuclease VII small subunit (EC 3.1.11.6).
2aml X-RAY 2005/08/09 YP_012655.1 358817 46906266 XB5679A
2fg0 X-RAY 2005/12/20 53686717 359701 53686717 CL5305L
2evr X-RAY 2005/10/31 53686717 359701 53686717 CL5305L