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Target ID: 390149
Target Name:GS13960A  Protein Accession:YP_212481.1  Local Accession: GS13960A  cDNA Accession:REF|NC_003228.3|:C3331565-3330519  PSCA PDB:4h40

Hover over nodes to see experimental data. Click on nodes to go to that point in the data below.

Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
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1
Name: Putative cell adhesion protein, fimbrial like protein, PF13149 family protein, DUF3988  Start Position: 23  End Position: 348
GNF Target Alias: HK100:SpeedET-GS13960A-bfa-348-23-348  Sequence Type: SEGMENT  Residues: 326
DNA Length: 978  Molecular Weight: 35371.74  Isoelectric Point: 4.91
Epsilon 280: 40340  Gravy Index: -0.23  Species: Bacteroides fragilis NCTC 9343
Activated: 1  Alanine Absolute: 25  Alanine Relative: 0.0767
Arginine Absolute: 14  Arginine Relative: 0.0429  Asparagine Absolute: 20
Asparagine Relative: 0.0613  Aspartic Acid Absolute: 20  Aspartic Acid Relative: 0.0613
Cysteine Absolute: 1  Cysteine Relative: 0.0031  Glutamic Acid Absolute: 15
Glutamic Acid Relative: 0.0460  Glutamine Absolute: 12  Glutamine Relative: 0.0368
Glycine Absolute: 26  Glycine Relative: 0.0798  Histidine Absolute: 4
Histidine Relative: 0.0123  Isoleucine Absolute: 17  Isoleucine Relative: 0.0521
Leucine Absolute: 31  Leucine Relative: 0.0951  Lysine Absolute: 11
Lysine Relative: 0.0337  Methionine Absolute: 7  Methionine Relative: 0.0215
Phenylalanine Absolute: 5  Phenylalanine Relative: 0.0153  Proline Absolute: 15
Proline Relative: 0.0460  Serine Absolute: 26  Serine Relative: 0.0798
Threonine Absolute: 32  Threonine Relative: 0.0982  Tryptophan Absolute: 3
Tryptophan Relative: 0.0092  Tyrosine Absolute: 16  Tyrosine Relative: 0.0491
Valine Absolute: 26  Valine Relative: 0.0798  Project: GNF Autogenerated
Selection Date: 2007-09-11  PFAM: submit  
ProposalRelationshipOwnerLab Name
64JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression