LOADING...
Target ID: 393152
Target Name:GS13419F  Protein Accession:YP_210403.1  Local Accession: GS13419F  cDNA Accession:REF|NC_003228.3|:856205-856948  PSCA PDB:4j8q

Hover over nodes to see experimental data. Click on nodes to go to that point in the data below.

Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
1 2 3 4 5 6 7 8 9 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157
1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68
1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68
1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68
1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68
1 2 3 5 6 7 8 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 1 3 4 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 1 3 4
1 2 3 4 5 6 7 8 9 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 32
1 2
1 2 3 5 6 7
1 2 4 5
1 2 4 5
1 2 4 5
1 2 4 5
1 2 4 5
1 2 4 5
4 5
1 1
Name: NigD-like protein, PF12667 family  Start Position: 22  End Position: 247
GNF Target Alias: PB1:SpeedET-GS13419F-bfa-247-22-247  Sequence Type: SEGMENT  Residues: 226
DNA Length: 678  Molecular Weight: 25420.10  Isoelectric Point: 4.71
Epsilon 280: 45380  Gravy Index: -0.48  Species: Bacteroides fragilis NCTC 9343
Activated: 2  Alanine Absolute: 15  Alanine Relative: 0.0664
Arginine Absolute: 8  Arginine Relative: 0.0354  Asparagine Absolute: 16
Asparagine Relative: 0.0708  Aspartic Acid Absolute: 21  Aspartic Acid Relative: 0.0929
Cysteine Absolute: 1  Cysteine Relative: 0.0044  Glutamic Acid Absolute: 15
Glutamic Acid Relative: 0.0664  Glutamine Absolute: 7  Glutamine Relative: 0.0310
Glycine Absolute: 18  Glycine Relative: 0.0796  Histidine Absolute: 4
Histidine Relative: 0.0177  Isoleucine Absolute: 9  Isoleucine Relative: 0.0398
Leucine Absolute: 18  Leucine Relative: 0.0796  Lysine Absolute: 15
Lysine Relative: 0.0664  Methionine Absolute: 4  Methionine Relative: 0.0177
Phenylalanine Absolute: 6  Phenylalanine Relative: 0.0265  Proline Absolute: 7
Proline Relative: 0.0310  Serine Absolute: 9  Serine Relative: 0.0398
Threonine Absolute: 13  Threonine Relative: 0.0575  Tryptophan Absolute: 5
Tryptophan Relative: 0.0221  Tyrosine Absolute: 12  Tyrosine Relative: 0.0531
Valine Absolute: 23  Valine Relative: 0.1018  Project: GNF Autogenerated
Selection Date: 2007-09-11  PFAM: submit  
ProposalRelationshipOwnerLab Name
64JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation