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Target ID: 394627
Target Name:MH7542A  Protein Accession:YP_165505.1  Local Accession: MH7542A  cDNA Accession:REF|NC_003911.11|:C255972-255034  PSCA PDB:3l12

Hover over nodes to see experimental data. Click on nodes to go to that point in the data below.

Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
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9
1 3 4 1 3 1 2 3 4 6 7 8 9 2
1
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1 1 1
Name: Putative glycerophosphoryl diester phosphodiesterase  Start Position: 1  End Position: 312
GNF Target Alias: HK100:SpeedET-MH7542A-spo-312-1-312  Sequence Type: COMPLETE  Residues: 312
DNA Length: 936  Molecular Weight: 34225.95  Isoelectric Point: 4.97
Epsilon 280: 40910  Gravy Index: -0.17  Species: S. pomeroyi DSS-3
Activated: 1  Alanine Absolute: 32  Alanine Relative: 0.1026
Arginine Absolute: 24  Arginine Relative: 0.0769  Asparagine Absolute: 6
Asparagine Relative: 0.0192  Aspartic Acid Absolute: 24  Aspartic Acid Relative: 0.0769
Cysteine Absolute: 3  Cysteine Relative: 0.0096  Glutamic Acid Absolute: 19
Glutamic Acid Relative: 0.0609  Glutamine Absolute: 10  Glutamine Relative: 0.0321
Glycine Absolute: 30  Glycine Relative: 0.0962  Histidine Absolute: 11
Histidine Relative: 0.0353  Isoleucine Absolute: 8  Isoleucine Relative: 0.0256
Leucine Absolute: 34  Leucine Relative: 0.1090  Lysine Absolute: 2
Lysine Relative: 0.0064  Methionine Absolute: 12  Methionine Relative: 0.0385
Phenylalanine Absolute: 8  Phenylalanine Relative: 0.0256  Proline Absolute: 19
Proline Relative: 0.0609  Serine Absolute: 10  Serine Relative: 0.0321
Threonine Absolute: 20  Threonine Relative: 0.0641  Tryptophan Absolute: 5
Tryptophan Relative: 0.0160  Tyrosine Absolute: 9  Tyrosine Relative: 0.0288
Valine Absolute: 26  Valine Relative: 0.0833  Project: Mega families assigned to JCSG 05-2008
Selection Date: 2008-06-02  PFAM: pdb file loaded for [Hinxton #116787]  
ProposalRelationshipOwnerLab Name
72JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression

STAGE: Protein Purification

STAGE: Crystallization

STAGE: Crystal Hit

STAGE: SDC Receiving