| Target ID: | 394678 | ||||||||||||
| Target Name: | GS12873A | Protein Accession: | YP_001303944.1 | Local Accession: | GS12873A | cDNA Accession: | REF|NC_009615.1|:C3081219-3080008 | PSCA | PDB:4ecg |
| Hover over nodes to see experimental data. Click on nodes to go to that point in the data below. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Name: | Putative iron-regulated protein A precursor, putative metalloendopeptidase, cytoplasmic membrane protein, Imelysin-like protein | Start Position: | 24 | End Position: | 403 | ||||||||||
| GNF Target Alias: | PB1:SpeedET-GS12873A-pdi-403-24-403 | Sequence Type: | SEGMENT | Residues: | 380 | ||||||||||
| DNA Length: | 1140 | Molecular Weight: | 41313.47 | Isoelectric Point: | 4.32 | ||||||||||
| Epsilon 280: | 56380 | Gravy Index: | -0.41 | Species: | P.distasonis ATCC 8503 | ||||||||||
| Activated: | 1 | Alanine Absolute: | 37 | Alanine Relative: | 0.0974 | ||||||||||
| Arginine Absolute: | 7 | Arginine Relative: | 0.0184 | Asparagine Absolute: | 27 | ||||||||||
| Asparagine Relative: | 0.0711 | Aspartic Acid Absolute: | 38 | Aspartic Acid Relative: | 0.1000 | ||||||||||
| Cysteine Absolute: | 2 | Cysteine Relative: | 0.0053 | Glutamic Acid Absolute: | 24 | ||||||||||
| Glutamic Acid Relative: | 0.0632 | Glutamine Absolute: | 7 | Glutamine Relative: | 0.0184 | ||||||||||
| Glycine Absolute: | 27 | Glycine Relative: | 0.0711 | Histidine Absolute: | 4 | ||||||||||
| Histidine Relative: | 0.0105 | Isoleucine Absolute: | 17 | Isoleucine Relative: | 0.0447 | ||||||||||
| Leucine Absolute: | 32 | Leucine Relative: | 0.0842 | Lysine Absolute: | 24 | ||||||||||
| Lysine Relative: | 0.0632 | Methionine Absolute: | 10 | Methionine Relative: | 0.0263 | ||||||||||
| Phenylalanine Absolute: | 12 | Phenylalanine Relative: | 0.0316 | Proline Absolute: | 17 | ||||||||||
| Proline Relative: | 0.0447 | Serine Absolute: | 30 | Serine Relative: | 0.0789 | ||||||||||
| Threonine Absolute: | 23 | Threonine Relative: | 0.0605 | Tryptophan Absolute: | 7 | ||||||||||
| Tryptophan Relative: | 0.0184 | Tyrosine Absolute: | 12 | Tyrosine Relative: | 0.0316 | ||||||||||
| Valine Absolute: | 23 | Valine Relative: | 0.0605 | Project: | GNF Autogenerated | ||||||||||
| Selection Date: | 2007-09-11 | PFAM: | submit | ||||||||||||
| |||||||||||||||
STAGE: Proposed Target
STAGE: Active Target
-
Plate: 63247 Cell: C11 Date: 2008-06-04 Status: Success
Previous Location: Plate: 0 Cell: 394678
- Sample Name: HK100:SpeedET-GS12873A-pdi-403-24-403 Date: 2008-10-19
- GNF Project Name: PSI2_GutSecreted(GS) Date: 2008-10-19
- GNF Program Name: JCSG Date: 2008-10-19
-
Plate: 96638 Cell: H01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 0 Cell: 394678
- Sample Name: PB1:SpeedET-GS12873A-pdi-403-24-403 Date: 2011-05-02
- GNF Project Name: PSI2_GutSecreted(GS) Date: 2011-05-02
- GNF Program Name: JCSG Date: 2011-05-02
STAGE: PCR Testing
-
Plate: 63247 Cell: C11 Date: 2008-06-04 Status: Success
Previous Location: Plate: 63247 Cell: C11
-
Plate: 96638 Cell: H01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 Cell: H01
STAGE: Amplifer Generation
-
Plate: 63247 Cell: C11 Date: 2008-06-04 Status: Success
Previous Location: Plate: 63247 Cell: C11
-
Plate: 96638 Cell: H01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 Cell: H01
STAGE: Orientation
-
Plate: 63247 Cell: C11 Date: 2008-06-04 Status: Success
Previous Location: Plate: 63247 Cell: C11
-
Plate: 96638 Cell: H01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 Cell: H01
STAGE: Plasmid Purification
-
Plate: 63247 (C-0621) Cell: C11 Date: 2008-06-04 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Clone ID: 46825 Date: 2008-06-07
- Strain/Vector: HK100 Date: 2008-10-19
- Clone Site: SpeedET Date: 2008-10-19
- Cloned Date: 2008-06-04 Date: 2008-10-19
-
Plate: 96638 (C-0959) Cell: H01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Clone ID: 92634 Date: 2011-05-02
- Strain/Vector: PB1 Date: 2011-05-02
- Clone Site: SpeedET Date: 2011-05-02
- Cloned Date: 2011-04-19 Date: 2011-05-15
STAGE: Micro Expression
-
Plate: 65442 Cell: C10 Date: 2008-07-29 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
-
Plate: 65442 Cell: C11 Date: 2008-07-29 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
-
Plate: 90838 Cell: H04 Date: 2010-03-08 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
STAGE: Expression
-
Plate: 63389 (E-1483) Cell: C10 Date: 2008-06-12 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Fermentation Date: 2008-06-12 Date: 2011-12-12
- Protein ID: 138480 Date: 2008-06-17
- Media: Native-TB Date: 2008-10-19
-
Plate: 63389 (E-1483) Cell: G09 Date: 2008-06-12 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Fermentation Date: 2008-06-12 Date: 2011-12-12
- Protein ID: 138527 Date: 2008-06-17
- Media: Native-TB Date: 2008-10-19
-
Plate: 69736 (E-1640) Cell: A03 Date: 2008-10-29 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Fermentation Date: 2008-10-29 Date: 2008-12-14
- Protein ID: 156645 Date: 2008-10-31
- Media: Met-Inhibition Date: 2008-12-14
-
Plate: 69736 (E-1640) Cell: B03 Date: 2008-10-29 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Fermentation Date: 2008-10-29 Date: 2008-12-14
- Protein ID: 156657 Date: 2008-10-31
- Media: Met-Inhibition Date: 2008-12-14
-
Plate: 69736 (E-1640) Cell: C03 Date: 2008-10-29 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Fermentation Date: 2008-10-29 Date: 2008-12-14
- Protein ID: 156669 Date: 2008-10-31
- Media: Met-Inhibition Date: 2008-12-14
-
Plate: 69736 (E-1640) Cell: D03 Date: 2008-10-29 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Fermentation Date: 2008-10-29 Date: 2008-12-14
- Protein ID: 156681 Date: 2008-10-31
- Media: Met-Inhibition Date: 2008-12-14
-
Plate: 69736 (E-1640) Cell: E03 Date: 2008-10-29 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Fermentation Date: 2008-10-29 Date: 2008-12-14
- Protein ID: 156693 Date: 2008-10-31
- Media: Met-Inhibition Date: 2008-12-14
-
Plate: 69736 (E-1640) Cell: F03 Date: 2008-10-29 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Fermentation Date: 2008-10-29 Date: 2008-12-14
- Protein ID: 156705 Date: 2008-10-31
- Media: Met-Inhibition Date: 2008-12-14
-
Plate: 69736 (E-1640) Cell: G03 Date: 2008-10-29 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Fermentation Date: 2008-10-29 Date: 2008-12-14
- Protein ID: 156717 Date: 2008-10-31
- Media: Met-Inhibition Date: 2008-12-14
-
Plate: 69736 (E-1640) Cell: H03 Date: 2008-10-29 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Fermentation Date: 2008-10-29 Date: 2008-12-14
- Protein ID: 156729 Date: 2008-10-31
- Media: Met-Inhibition Date: 2008-12-14
-
Plate: 94411 (E-2141) Cell: B04 Date: 2010-09-27 Status: Success
Previous Location: Plate: 63247 (C-0621) Cell: C11
- Fermentation Date: 2010-09-27 Date: 2011-05-05
- Protein ID: 313220 Date: 2010-09-29
- Media: Native-TB Date: 2010-09-29
-
Plate: 96652 (E-2273) Cell: A01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-04-19 Date: 2011-11-27
- Protein ID: 331668 Date: 2011-05-02
- Media: Met-Inhibition Date: 2011-05-02
-
Plate: 96652 (E-2273) Cell: B01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-04-19 Date: 2011-11-27
- Protein ID: 331680 Date: 2011-05-02
- Media: Met-Inhibition Date: 2011-05-02
-
Plate: 96652 (E-2273) Cell: C01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-04-19 Date: 2011-11-27
- Protein ID: 331692 Date: 2011-05-02
- Media: Met-Inhibition Date: 2011-05-02
-
Plate: 96652 (E-2273) Cell: D01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-04-19 Date: 2011-11-27
- Protein ID: 331704 Date: 2011-05-02
- Media: Met-Inhibition Date: 2011-05-02
-
Plate: 96652 (E-2273) Cell: E01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-04-19 Date: 2011-11-27
- Protein ID: 331716 Date: 2011-05-02
- Media: Met-Inhibition Date: 2011-05-02
-
Plate: 96652 (E-2273) Cell: F01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-04-19 Date: 2011-11-27
- Protein ID: 331728 Date: 2011-05-02
- Media: Met-Inhibition Date: 2011-05-02
-
Plate: 96652 (E-2273) Cell: G01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-04-19 Date: 2011-11-27
- Protein ID: 331740 Date: 2011-05-02
- Media: Met-Inhibition Date: 2011-05-02
-
Plate: 96652 (E-2273) Cell: H01 Date: 2011-04-19 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-04-19 Date: 2011-11-27
- Protein ID: 331752 Date: 2011-05-02
- Media: Met-Inhibition Date: 2011-05-02
-
Plate: 97178 (E-2291) Cell: A12 Date: 2011-05-11 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-05-11 Date: 2011-08-21
- GNFuge Date: 2011-05-24 Date: 2011-08-21
- Protein ID: 334271 Date: 2011-05-13
- Media: Met-Inhibition Date: 2011-05-13
-
Plate: 97178 (E-2291) Cell: B12 Date: 2011-05-11 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-05-11 Date: 2011-08-21
- GNFuge Date: 2011-05-24 Date: 2011-08-21
- Protein ID: 334283 Date: 2011-05-13
- Media: Met-Inhibition Date: 2011-05-13
-
Plate: 97178 (E-2291) Cell: C12 Date: 2011-05-11 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-05-11 Date: 2011-08-21
- GNFuge Date: 2011-05-24 Date: 2011-08-21
- Protein ID: 334295 Date: 2011-05-13
- Media: Met-Inhibition Date: 2011-05-13
-
Plate: 97178 (E-2291) Cell: D12 Date: 2011-05-11 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-05-11 Date: 2011-08-21
- GNFuge Date: 2011-05-24 Date: 2011-08-21
- Protein ID: 334307 Date: 2011-05-13
- Media: Met-Inhibition Date: 2011-05-13
-
Plate: 97178 (E-2291) Cell: E12 Date: 2011-05-11 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-05-11 Date: 2011-08-21
- GNFuge Date: 2011-05-24 Date: 2011-08-21
- Protein ID: 334319 Date: 2011-05-13
- Media: Met-Inhibition Date: 2011-05-13
-
Plate: 97178 (E-2291) Cell: F12 Date: 2011-05-11 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-05-11 Date: 2011-08-21
- GNFuge Date: 2011-05-24 Date: 2011-08-21
- Protein ID: 334331 Date: 2011-05-13
- Media: Met-Inhibition Date: 2011-05-13
-
Plate: 97178 (E-2291) Cell: G12 Date: 2011-05-11 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-05-11 Date: 2011-08-21
- GNFuge Date: 2011-05-24 Date: 2011-08-21
- Protein ID: 334343 Date: 2011-05-13
- Media: Met-Inhibition Date: 2011-05-13
-
Plate: 97178 (E-2291) Cell: H12 Date: 2011-05-11 Status: Success
Previous Location: Plate: 96638 (C-0959) Cell: H01
- Fermentation Date: 2011-05-11 Date: 2011-08-21
- GNFuge Date: 2011-05-24 Date: 2011-08-21
- Protein ID: 334355 Date: 2011-05-13
- Media: Met-Inhibition Date: 2011-05-13
STAGE: Protein Purification
-
Plate: 63389 (E-1483) Cell: C10 Date: 2008-06-17 Status: Success
Previous Location: Plate: 63389 (E-1483) Cell: C10
-
Plate: 63389 (E-1483) Cell: G09 Date: 2008-06-17 Status: Success
Previous Location: Plate: 63389 (E-1483) Cell: G09
-
Plate: 69736 (E-1640) Cell: A03 Date: 2008-10-31 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: A03
- Purified Concentration (mg/mL): 14.1 Date: 2008-12-14
-
Plate: 69736 (E-1640) Cell: B03 Date: 2008-10-31 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: B03
-
Plate: 69736 (E-1640) Cell: C03 Date: 2008-10-31 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: C03
-
Plate: 69736 (E-1640) Cell: D03 Date: 2008-10-31 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: D03
-
Plate: 69736 (E-1640) Cell: E03 Date: 2008-10-31 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: E03
-
Plate: 69736 (E-1640) Cell: F03 Date: 2008-10-31 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: F03
-
Plate: 69736 (E-1640) Cell: G03 Date: 2008-10-31 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: G03
-
Plate: 69736 (E-1640) Cell: H03 Date: 2008-10-31 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: H03
-
Plate: 94411 (E-2141) Cell: B04 Date: 2010-09-29 Status: Success
Previous Location: Plate: 94411 (E-2141) Cell: B04
-
Plate: 96652 (E-2273) Cell: A01 Date: 2011-05-02 Status: Success
Previous Location: Plate: 96652 (E-2273) Cell: A01
- Purified Concentration (mg/mL): 20.0 Date: 2011-05-15
-
Plate: 96652 (E-2273) Cell: B01 Date: 2011-05-02 Status: Success
Previous Location: Plate: 96652 (E-2273) Cell: B01
-
Plate: 96652 (E-2273) Cell: C01 Date: 2011-05-02 Status: Success
Previous Location: Plate: 96652 (E-2273) Cell: C01
-
Plate: 96652 (E-2273) Cell: D01 Date: 2011-05-02 Status: Success
Previous Location: Plate: 96652 (E-2273) Cell: D01
-
Plate: 96652 (E-2273) Cell: E01 Date: 2011-05-02 Status: Success
Previous Location: Plate: 96652 (E-2273) Cell: E01
-
Plate: 96652 (E-2273) Cell: F01 Date: 2011-05-02 Status: Success
Previous Location: Plate: 96652 (E-2273) Cell: F01
-
Plate: 96652 (E-2273) Cell: G01 Date: 2011-05-02 Status: Success
Previous Location: Plate: 96652 (E-2273) Cell: G01
-
Plate: 96652 (E-2273) Cell: H01 Date: 2011-05-02 Status: Success
Previous Location: Plate: 96652 (E-2273) Cell: H01
-
Plate: 97178 (E-2291) Cell: A12 Date: 2011-05-13 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: A12
- Purified Concentration (mg/mL): 20.8 Date: 2011-06-05
-
Plate: 97178 (E-2291) Cell: B12 Date: 2011-05-13 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: B12
-
Plate: 97178 (E-2291) Cell: C12 Date: 2011-05-13 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: C12
-
Plate: 97178 (E-2291) Cell: D12 Date: 2011-05-13 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: D12
-
Plate: 97178 (E-2291) Cell: E12 Date: 2011-05-13 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: E12
-
Plate: 97178 (E-2291) Cell: F12 Date: 2011-05-13 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: F12
-
Plate: 97178 (E-2291) Cell: G12 Date: 2011-05-13 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: G12
-
Plate: 97178 (E-2291) Cell: H12 Date: 2011-05-13 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: H12
STAGE: Crystallization
-
Plate: 72686 (G0044980) Cell: XT Date: 2009-01-20 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: A03
- Screen Type: Sparse Matrix Date: 2009-02-25
- Setup Date: 2009-01-20 Date: 2010-11-22
- Setup Temp (C): 4 Date: 2009-02-25
- Crystal Conditions: GNF1 Date: 2009-02-25
- Drop Volume (nl): 200.0 Date: 2009-02-25
- Precipitate Volume (nl): 200 Date: 2009-02-25
- Reservoir Volume (ul): 50.0 Date: 2009-02-25
-
Plate: 72687 (G0044999) Cell: XT Date: 2009-01-20 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: A03
- Screen Type: Sparse Matrix Date: 2009-02-25
- Setup Date: 2009-01-20 Date: 2009-02-25
- Setup Temp (C): 4 Date: 2009-02-25
- Crystal Conditions: GNF2 Date: 2009-02-25
- Drop Volume (nl): 200.0 Date: 2009-02-25
- Precipitate Volume (nl): 200 Date: 2009-02-25
- Reservoir Volume (ul): 50.0 Date: 2009-02-25
-
Plate: 72688 (G0044447) Cell: XT Date: 2009-01-20 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: A03
- Screen Type: Sparse Matrix Date: 2009-02-25
- Setup Date: 2009-01-20 Date: 2009-02-25
- Setup Temp (C): 4 Date: 2009-02-25
- Crystal Conditions: GNF3 Date: 2009-02-25
- Drop Volume (nl): 200.0 Date: 2009-02-25
- Precipitate Volume (nl): 200 Date: 2009-02-25
- Reservoir Volume (ul): 50.0 Date: 2009-02-25
-
Plate: 72689 (G0044346) Cell: XT Date: 2009-01-20 Status: Success
Previous Location: Plate: 69736 (E-1640) Cell: A03
- Screen Type: Sparse Matrix Date: 2009-02-25
- Setup Date: 2009-01-20 Date: 2009-02-25
- Setup Temp (C): 4 Date: 2009-02-25
- Crystal Conditions: GNF4 Date: 2009-02-25
- Drop Volume (nl): 200.0 Date: 2009-02-25
- Precipitate Volume (nl): 200 Date: 2009-02-25
- Reservoir Volume (ul): 50.0 Date: 2009-02-25
-
Plate: 98480 (S0027896) Cell: XT Date: 2011-07-06 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: A12
- Screen Type: Sparse Matrix Date: 2011-08-06
- Setup Date: 2011-07-06 Date: 2011-08-06
- Setup Temp (C): 4 Date: 2011-07-07
- Crystal Conditions: The JCSG Core Suite I Date: 2011-08-06
- Drop Volume (nl): 200 Date: 2011-08-06
- Reservoir Volume (ul): 50 Date: 2011-08-06
-
Plate: 98481 (S0027897) Cell: XT Date: 2011-07-06 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: A12
- Screen Type: Sparse Matrix Date: 2011-08-06
- Setup Date: 2011-07-06 Date: 2011-08-06
- Setup Temp (C): 20 Date: 2011-07-07
- Crystal Conditions: The JCSG Core Suite I Date: 2011-08-06
- Drop Volume (nl): 200 Date: 2011-08-06
- Reservoir Volume (ul): 50 Date: 2011-08-06
-
Plate: 98482 (S0027898) Cell: XT Date: 2011-07-06 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: A12
- Screen Type: Sparse Matrix Date: 2011-08-06
- Setup Date: 2011-07-06 Date: 2011-08-06
- Setup Temp (C): 4 Date: 2011-07-07
- Crystal Conditions: The JCSG Core Suite II Date: 2011-08-06
- Drop Volume (nl): 200 Date: 2011-08-06
- Reservoir Volume (ul): 50 Date: 2011-08-06
-
Plate: 98483 (S0027899) Cell: XT Date: 2011-07-06 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: A12
- Screen Type: Sparse Matrix Date: 2011-08-06
- Setup Date: 2011-07-06 Date: 2011-08-06
- Setup Temp (C): 20 Date: 2011-07-07
- Crystal Conditions: The JCSG Core Suite II Date: 2011-08-06
- Drop Volume (nl): 200 Date: 2011-08-06
- Reservoir Volume (ul): 50 Date: 2011-08-06
-
Plate: 98484 (S0027901) Cell: XT Date: 2011-07-06 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: A12
- Screen Type: Sparse Matrix Date: 2011-08-06
- Setup Date: 2011-07-06 Date: 2011-08-06
- Setup Temp (C): 4 Date: 2011-07-07
- Crystal Conditions: The JCSG Core Suite III Date: 2011-08-06
- Drop Volume (nl): 200 Date: 2011-08-06
- Reservoir Volume (ul): 50 Date: 2011-08-06
-
Plate: 98485 (S0027902) Cell: XT Date: 2011-07-06 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: A12
- Screen Type: Sparse Matrix Date: 2011-08-06
- Setup Date: 2011-07-06 Date: 2011-08-06
- Setup Temp (C): 20 Date: 2011-07-07
- Crystal Conditions: The JCSG Core Suite III Date: 2011-08-06
- Drop Volume (nl): 200 Date: 2011-08-06
- Reservoir Volume (ul): 50 Date: 2011-08-06
-
Plate: 98486 (S0027904) Cell: XT Date: 2011-07-06 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: A12
- Screen Type: Sparse Matrix Date: 2011-08-06
- Setup Date: 2011-07-06 Date: 2011-08-06
- Setup Temp (C): 4 Date: 2011-07-07
- Crystal Conditions: The JCSG Core Suite IV Date: 2011-08-06
- Drop Volume (nl): 200 Date: 2011-08-06
- Reservoir Volume (ul): 50 Date: 2011-08-06
-
Plate: 98487 (S0027905) Cell: XT Date: 2011-07-06 Status: Success
Previous Location: Plate: 97178 (E-2291) Cell: A12
- Screen Type: Sparse Matrix Date: 2011-08-06
- Setup Date: 2011-07-06 Date: 2011-08-06
- Setup Temp (C): 20 Date: 2011-07-07
- Crystal Conditions: The JCSG Core Suite IV Date: 2011-08-06
- Drop Volume (nl): 200 Date: 2011-08-06
- Reservoir Volume (ul): 50 Date: 2011-08-06
STAGE: Crystal Hit
-
Plate: 72686 (G0044980) Cell: E09 Date: 2009-01-20 Status: Success
Previous Location: Plate: 72686 (G0044980) Cell: XT
- Setup Date: 2009-01-20 Date: 2009-03-01
- Screen Date: 2009-02-03 Date: 2009-03-01
- Screen Conditions: GNF1 E09: 0.200M (NH4)2SO4, 20.00% PEG-3350, No Buffer pH 6.0 Date: 2009-03-01
- Crystal Classification: CRYSTAL HIT Date: 2009-03-01
-
Plate: 98482 (S0027898) Cell: B10 Date: 2011-07-06 Status: Success
Previous Location: Plate: 98482 (S0027898) Cell: XT
- Setup Date: 2011-07-06 Date: 2011-08-14
- Screen Date: 2011-07-15 Date: 2011-08-14
- Screen Conditions: TheJCSGCoreSuiteII B10: 70.00% 2-methyl-2,4-pentanediol, 0.1M HEPES pH 7.5 Date: 2011-08-07
- Crystal Classification: CRYSTAL HIT Date: 2011-08-07
-
Plate: 98484 (S0027901) Cell: G10 Date: 2011-07-06 Status: Success
Previous Location: Plate: 98484 (S0027901) Cell: XT
- Setup Date: 2011-07-06 Date: 2011-08-14
- Screen Date: 2011-07-15 Date: 2011-08-14
- Screen Conditions: TheJCSGCoreSuiteIII G10: 30.00% polyethylene glycol 400, 0.100M Cadmium Chloride, 0.1M sodium acetate pH 4.6 Date: 2011-08-07
- Crystal Classification: CRYSTAL HIT Date: 2011-08-07
-
Plate: 98485 (S0027902) Cell: A10 Date: 2011-07-06 Status: Success
Previous Location: Plate: 98485 (S0027902) Cell: XT
- Setup Date: 2011-07-06 Date: 2011-08-14
- Screen Date: 2011-07-15 Date: 2011-08-14
- Screen Conditions: TheJCSGCoreSuiteIII A10: 30.00% polyethylene glycol 200, 0.200M ammonium sulfate, 0.1M CAPS pH 10.5 Date: 2011-08-07
- Crystal Classification: CRYSTAL HIT Date: 2011-08-07
-
Plate: 98486 (S0027904) Cell: B04 Date: 2011-07-06 Status: Success
Previous Location: Plate: 98486 (S0027904) Cell: XT
- Setup Date: 2011-07-06 Date: 2011-09-04
- Screen Date: 2011-08-04 Date: 2011-09-04
- Screen Conditions: TheJCSGCoreSuiteIV B04: 65.00% 2-methyl-2,4-pentanediol, 0.1M Bicine pH 9.0 Date: 2011-08-07
- Crystal Classification: CRYSTAL HIT Date: 2011-08-07
-
Plate: 98486 (S0027904) Cell: C11 Date: 2011-07-06 Status: Success
Previous Location: Plate: 98486 (S0027904) Cell: XT
- Setup Date: 2011-07-06 Date: 2011-09-04
- Screen Date: 2011-08-04 Date: 2011-09-04
- Screen Conditions: TheJCSGCoreSuiteIV C11: 65.00% 2-methyl-2,4-pentanediol, 0.1M TRIS pH 8.0 Date: 2011-08-07
- Crystal Classification: CRYSTAL HIT Date: 2011-08-07
-
Plate: 98486 (S0027904) Cell: E06 Date: 2011-07-06 Status: Success
Previous Location: Plate: 98486 (S0027904) Cell: XT
- Setup Date: 2011-07-06 Date: 2011-09-04
- Screen Date: 2011-08-04 Date: 2011-09-04
- Screen Conditions: TheJCSGCoreSuiteIV E06: 40.00% polyethylene glycol 400, 0.200M calcium acetate, 0.1M HEPES pH 7.5 Date: 2011-08-07
- Crystal Classification: PROBABLY HARVESTABLE Date: 2011-08-07
STAGE: SDC Receiving
-
Dewar: 99625 (Capricorn-08/17/2011) Cassette: SSRL00337 (SSRL00337Capricorn-08/17/2011) Cell: I5 Date: 2011-08-17 Status: Success
Previous Location: Plate: 98486 (S0027904) Cell: E06
- Shipment ID: 2480 Date: 2011-08-17
- Crystal Comments: rod Date: 2011-08-17
- Ship Date: 2011-08-17 Date: 2011-08-17
- Crystal Id: 170257 Date: 2011-08-17
- Pin Position: 90 Date: 2011-08-17
- Ship Position: SSRL00337 Date: 2011-08-17
- Mount Date: 2011-08-16 Date: 2011-08-17
-
Dewar: 99625 (Capricorn-08/17/2011) Cassette: SSRL00337 (SSRL00337Capricorn-08/17/2011) Cell: I6 Date: 2011-08-17 Status: Success
Previous Location: Plate: 98486 (S0027904) Cell: E06
- Shipment ID: 2480 Date: 2011-08-17
- Crystal Comments: rod Date: 2011-08-17
- Ship Date: 2011-08-17 Date: 2011-08-17
- Crystal Id: 170258 Date: 2011-08-17
- Pin Position: 4205 Date: 2011-08-17
- Ship Position: SSRL00337 Date: 2011-08-17
- SDC Dewar Alias: SDC1 Date: 2012-03-16
- SDC Dewar Position: 17 Date: 2012-03-16
- SDC Pin Position: K6 Date: 2012-03-16
- Stop Flag: 0 Date: 2012-01-17
- SDC Stage: 2900 Date: 2012-03-26
- Mount Date: 2011-08-16 Date: 2011-08-17
-
Dewar: 99625 (Capricorn-08/17/2011) Cassette: SSRL00337 (SSRL00337Capricorn-08/17/2011) Cell: I7 Date: 2011-08-17 Status: Success
Previous Location: Plate: 98486 (S0027904) Cell: E06
- Shipment ID: 2480 Date: 2011-08-17
- Crystal Comments: rod Date: 2011-08-17
- Ship Date: 2011-08-17 Date: 2011-08-17
- Crystal Id: 170259 Date: 2011-08-17
- Pin Position: 7846 Date: 2011-08-17
- Ship Position: SSRL00337 Date: 2011-08-17
- SDC Dewar Alias: SDC1 Date: 2012-03-16
- SDC Dewar Position: 17 Date: 2012-03-16
- SDC Pin Position: K7 Date: 2012-03-16
- Mount Date: 2011-08-16 Date: 2011-08-17
-
Dewar: 99625 (Capricorn-08/17/2011) Cassette: SSRL00337 (SSRL00337Capricorn-08/17/2011) Cell: I8 Date: 2011-08-17 Status: Success
Previous Location: Plate: 98486 (S0027904) Cell: E06
- Shipment ID: 2480 Date: 2011-08-17
- Crystal Comments: rod Date: 2011-08-17
- Ship Date: 2011-08-17 Date: 2011-08-17
- Crystal Id: 170260 Date: 2011-08-17
- Pin Position: 7844 Date: 2011-08-17
- Ship Position: SSRL00337 Date: 2011-08-17
- Mount Date: 2011-08-16 Date: 2011-08-17
STAGE: Screening
-
Dewar: 99625 (Capricorn-08/17/2011) Cassette: SSRL00337 (SSRL00337Capricorn-08/17/2011) Cell: I5 Date: 2011-08-21 Status: Success
- Image Directory: /data/jcsg/ssrl4/micro2/20110818/screening/cassette337/GS12873A /data/jcsg/ssrl5/9_2/20120111/screening/cassette361 Date: 2012-01-16
- Xtal Quality: 7 Date: 2011-09-12
- Ice Rings: 0 Date: 2011-09-12
- Diffraction Quality: 10 Date: 2012-01-16
- Single Xtal: 1 Date: 2011-09-12
- Spot Shape: 6 Date: 2012-01-16
- Maximum Resolution: 2 Date: 2012-01-16
- Beamline: SSRL BL9_2 Date: 2012-01-16
- Robot Y or N: 1 Date: 2011-09-12
- Screen Date: 2011-08-21 Date: 2012-01-16
- Freezing: CLEAR Date: 2011-09-12
- Loop: OK Date: 2011-09-12
- Crystal Condition: CND Date: 2011-09-12
-
Dewar: 99625 (Capricorn-08/17/2011) Cassette: SSRL00337 (SSRL00337Capricorn-08/17/2011) Cell: I6 Date: 2011-08-21 Status: Success
- Image Directory: /data/jcsg/ssrl4/micro2/20110818/screening/cassette337/GS12873A /data/jcsg/ssrl5/9_2/20120111/screening/cassette361 Date: 2012-01-16
- Xtal Quality: 8 Date: 2012-01-16
- Ice Rings: 0 Date: 2011-09-12
- Diffraction Quality: 3 Date: 2012-01-16
- Single Xtal: 1 Date: 2011-09-12
- Spot Shape: 9 Date: 2011-09-12
- Maximum Resolution: 2.3 Date: 2012-01-16
- Beamline: SSRL BL9_2 Date: 2012-01-16
- Robot Y or N: 1 Date: 2011-09-12
- Screen Date: 2011-08-21 Date: 2012-03-16
- Freezing: CLEAR Date: 2011-09-12
- Loop: OK Date: 2011-09-12
- Crystal Condition: CND Date: 2011-09-12
-
Dewar: 99625 (Capricorn-08/17/2011) Cassette: SSRL00337 (SSRL00337Capricorn-08/17/2011) Cell: I7 Date: 2011-08-21 Status: Success
- Image Directory: /data/jcsg/ssrl4/micro2/20110818/screening/cassette337/GS12873A /data/jcsg/ssrl5/9_2/20120111/screening/cassette361 Date: 2012-01-16
- Xtal Quality: 7 Date: 2012-01-16
- Ice Rings: 0 Date: 2011-09-12
- Diffraction Quality: 4 Date: 2011-09-12
- Single Xtal: 1 Date: 2011-09-12
- Spot Shape: 9 Date: 2011-09-12
- Maximum Resolution: 2.7 Date: 2012-01-16
- Beamline: SSRL BL9_2 Date: 2012-01-16
- Robot Y or N: 1 Date: 2011-09-12
- Screen Date: 2011-08-21 Date: 2012-03-16
- Freezing: CLEAR Date: 2011-09-12
- Loop: OK Date: 2011-09-12
- Crystal Condition: CND Date: 2011-09-12
-
Dewar: 99625 (Capricorn-08/17/2011) Cassette: SSRL00337 (SSRL00337Capricorn-08/17/2011) Cell: I8 Date: 2011-08-21 Status: Success
- Image Directory: /data/jcsg/ssrl4/micro2/20110818/screening/cassette337/GS12873A /data/jcsg/ssrl5/9_2/20120111/screening/cassette361 Date: 2012-01-16
- Xtal Quality: 7 Date: 2012-01-16
- Ice Rings: 0 Date: 2011-09-12
- Diffraction Quality: 4 Date: 2011-09-12
- Single Xtal: 1 Date: 2011-09-12
- Spot Shape: 6 Date: 2012-01-16
- Maximum Resolution: 2.7 Date: 2012-01-16
- Beamline: SSRL BL9_2 Date: 2012-01-16
- Robot Y or N: 1 Date: 2011-09-12
- Screen Date: 2011-08-21 Date: 2012-01-16
- Freezing: CLEAR Date: 2011-09-12
- Loop: OK Date: 2011-09-12
- Crystal Condition: CND Date: 2011-09-12
STAGE: Data Collection
-
Collection: 104508 Cell: 1 Date: 2012-01-13 Status: Success
Previous Location: Dewar: 99625 (Capricorn-08/17/2011) Cassette: SSRL00337 (SSRL00337Capricorn-08/17/2011) Cell: I6
- CollectData.xml: CollectData.xml Date: 2012-01-17
- Beamline.xml: beamline.xml Date: 2012-01-17
- Notes file: notes.txt Date: 2012-01-17
- Beamline: BL9-2 Date: 2012-01-17
- ExperimentType: X-Ray Date: 2012-01-17
- Program name: Blu-Ice Date: 2012-01-17
- Program version: 5.0 Date: 2012-01-17
- Synchrotron: SSRL Date: 2012-01-17
- Detector name: MAR325 Date: 2012-01-17
- Detector type: CCD Date: 2012-01-17
- Detector serial: 11 Date: 2012-01-17
- Detector manufacturer: MAR Date: 2012-01-17
- BeamlineInfoURL: http://biosync.sdsc.edu/ssrl/BL9-2.html Date: 2012-01-17
- MOSFLM_DETECTOR_PARAMETERS: !commented out due to use of new mosflm !DETECTOR ROTATION HORIZ ANTI FAST HORIZONTAL ORIGIN UR rectangular TYPE MARCCD !SIZE 4096 4096 HEADER 1 byte 4096 !LIMITS XMIN 0 XMAX 162.5 YMIN 0 YMAX 162.5 xscan 2048 yscan 2048 GAIN 0.3 Date: 2012-05-21
- MOSFLM_BEAMLINE_PARAMETERS: SYNCHROTRON POLARIZATION 0.92 DIVERGENCE 0.250 0.030 DISPERSION 0.00020 Date: 2012-05-21
- DC Date: 2012-01-13 Date: 2012-01-17
- Performed By: Hsiu-Ju (Jessica) Chiu Date: 2012-01-17
- Temperature (K): 100 Date: 2012-01-17
- Beamline: BL9-2 Date: 2012-01-17
- ImageDirectory: /data/jcsg/ssrl5/9_2/20120111/collection/GS12873A/170258/ Date: 2012-01-17
- Description: l1s1 Date: 2012-01-17
- Wavelength: 0.97949 Date: 2012-01-17
- Anomalous fprimv: -10 Date: 2012-01-17
- Anomalous fprprv: 2.6 Date: 2012-01-17
- DetectorMode: undefined Date: 2012-01-17
- Distance: 285.001 Date: 2012-01-17
- BeamCenter X: 162.5 Date: 2012-01-17
- BeamCenter Y: 162.5 Date: 2012-01-17
- ImagePrefix: 170258_1_E1 Date: 2012-01-17
- ImageSuffix: mccd Date: 2012-01-17
- PhiDelta: 0.50 Date: 2012-01-17
- PhiStart: 196.0 Date: 2012-01-17
- FrameNumber start: 1 Date: 2012-01-17
- FrameNumber end: 200 Date: 2012-01-17
- Monochromatic_Laue: M Date: 2012-05-21
- Monochromator: double crystal Date: 2012-05-21
- Optics: double crystal monochromator Date: 2012-05-21
- Denzo Detector Format: ccd unsupported-m325 Date: 2012-05-21
- Denzo Detector Format xdispsize: 810 Date: 2012-05-21
- Denzo Beamline Parameters: [overload value 65535] [film rotation 90.0] air absorption length 3500 monochromator 0.87 cassette rotx 0.0 roty 0.0 rotz 0.00 radial offset 0.000 angular offset 0.000 Date: 2012-05-21
- Denzo XDisp Peaksize: 3 Date: 2012-05-21
- XDS Detector Parameters: DETECTOR=CCDCHESS MINIMUM_VALID_PIXEL_VALUE=0 OVERLOAD=65000 DIRECTION_OF_DETECTOR_X-AXIS= 1.0 0.0 0.0 DIRECTION_OF_DETECTOR_Y-AXIS= 0.0 1.0 0.0 !Half corner is ~1.2, Full CCD 1.4, 1.0 for no corner TRUSTED_REGION=0.0 1.2 NX=4096 NY=4096 QX=0.079346 QY=0.079346 Date: 2012-05-21
- XDS Beamline Parameters: POLARIZATION_PLANE_NORMAL= 0.0 1.0 0.0 INCIDENT_BEAM_DIRECTION=0.0 0.0 1.0 FRACTION_OF_POLARIZATION=0.92 !SSRL ! 0.5 for unpolarized beam AIR=0.001 !Air absorption coefficient of x-rays Date: 2012-05-21
- XDS Image Format: DIRECT TIFF Date: 2012-05-21
-
Collection: 104508 Cell: 2 Date: 2012-01-13 Status: Success
Previous Location: Dewar: 99625 (Capricorn-08/17/2011) Cassette: SSRL00337 (SSRL00337Capricorn-08/17/2011) Cell: I6
- CollectData.xml: CollectData.xml Date: 2012-01-17
- Beamline.xml: beamline.xml Date: 2012-01-17
- Notes file: notes.txt Date: 2012-01-17
- Beamline: BL9-2 Date: 2012-01-17
- ExperimentType: X-Ray Date: 2012-01-17
- Program name: Blu-Ice Date: 2012-01-17
- Program version: 5.0 Date: 2012-01-17
- Synchrotron: SSRL Date: 2012-01-17
- Detector name: MAR325 Date: 2012-01-17
- Detector type: CCD Date: 2012-01-17
- Detector serial: 11 Date: 2012-01-17
- Detector manufacturer: MAR Date: 2012-01-17
- BeamlineInfoURL: http://biosync.sdsc.edu/ssrl/BL9-2.html Date: 2012-01-17
- MOSFLM_DETECTOR_PARAMETERS: !commented out due to use of new mosflm !DETECTOR ROTATION HORIZ ANTI FAST HORIZONTAL ORIGIN UR rectangular TYPE MARCCD !SIZE 4096 4096 HEADER 1 byte 4096 !LIMITS XMIN 0 XMAX 162.5 YMIN 0 YMAX 162.5 xscan 2048 yscan 2048 GAIN 0.3 Date: 2012-05-21
- MOSFLM_BEAMLINE_PARAMETERS: SYNCHROTRON POLARIZATION 0.92 DIVERGENCE 0.250 0.030 DISPERSION 0.00020 Date: 2012-05-21
- DC Date: 2012-01-13 Date: 2012-01-17
- Performed By: Hsiu-Ju (Jessica) Chiu Date: 2012-01-17
- Temperature (K): 100 Date: 2012-01-17
- Beamline: BL9-2 Date: 2012-01-17
- ImageDirectory: /data/jcsg/ssrl5/9_2/20120111/collection/GS12873A/170258/ Date: 2012-01-17
- Description: l2s1 Date: 2012-01-17
- Wavelength: 0.91837 Date: 2012-01-17
- Anomalous fprimv: -1.8 Date: 2012-01-17
- Anomalous fprprv: 3.4 Date: 2012-01-17
- DetectorMode: undefined Date: 2012-01-17
- Distance: 285.001 Date: 2012-01-17
- BeamCenter X: 162.5 Date: 2012-01-17
- BeamCenter Y: 162.5 Date: 2012-01-17
- ImagePrefix: 170258_1_E2 Date: 2012-01-17
- ImageSuffix: mccd Date: 2012-01-17
- PhiDelta: 0.50 Date: 2012-01-17
- PhiStart: 196.0 Date: 2012-01-17
- FrameNumber start: 1 Date: 2012-01-17
- FrameNumber end: 200 Date: 2012-01-17
- Monochromatic_Laue: M Date: 2012-05-21
- Monochromator: double crystal Date: 2012-05-21
- Optics: double crystal monochromator Date: 2012-05-21
- Denzo Detector Format: ccd unsupported-m325 Date: 2012-05-21
- Denzo Detector Format xdispsize: 810 Date: 2012-05-21
- Denzo Beamline Parameters: [overload value 65535] [film rotation 90.0] air absorption length 3500 monochromator 0.87 cassette rotx 0.0 roty 0.0 rotz 0.00 radial offset 0.000 angular offset 0.000 Date: 2012-05-21
- Denzo XDisp Peaksize: 3 Date: 2012-05-21
- XDS Detector Parameters: DETECTOR=CCDCHESS MINIMUM_VALID_PIXEL_VALUE=0 OVERLOAD=65000 DIRECTION_OF_DETECTOR_X-AXIS= 1.0 0.0 0.0 DIRECTION_OF_DETECTOR_Y-AXIS= 0.0 1.0 0.0 !Half corner is ~1.2, Full CCD 1.4, 1.0 for no corner TRUSTED_REGION=0.0 1.2 NX=4096 NY=4096 QX=0.079346 QY=0.079346 Date: 2012-05-21
- XDS Beamline Parameters: POLARIZATION_PLANE_NORMAL= 0.0 1.0 0.0 INCIDENT_BEAM_DIRECTION=0.0 0.0 1.0 FRACTION_OF_POLARIZATION=0.92 !SSRL ! 0.5 for unpolarized beam AIR=0.001 !Air absorption coefficient of x-rays Date: 2012-05-21
- XDS Image Format: DIRECT TIFF Date: 2012-05-21
-
Collection: 104508 Cell: 3 Date: 2012-01-13 Status: Success
Previous Location: Dewar: 99625 (Capricorn-08/17/2011) Cassette: SSRL00337 (SSRL00337Capricorn-08/17/2011) Cell: I6
- CollectData.xml: CollectData.xml Date: 2012-01-17
- Beamline.xml: beamline.xml Date: 2012-01-17
- Notes file: notes.txt Date: 2012-01-17
- Beamline: BL9-2 Date: 2012-01-17
- ExperimentType: X-Ray Date: 2012-01-17
- Program name: Blu-Ice Date: 2012-01-17
- Program version: 5.0 Date: 2012-01-17
- Synchrotron: SSRL Date: 2012-01-17
- Detector name: MAR325 Date: 2012-01-17
- Detector type: CCD Date: 2012-01-17
- Detector serial: 11 Date: 2012-01-17
- Detector manufacturer: MAR Date: 2012-01-17
- BeamlineInfoURL: http://biosync.sdsc.edu/ssrl/BL9-2.html Date: 2012-01-17
- MOSFLM_DETECTOR_PARAMETERS: !commented out due to use of new mosflm !DETECTOR ROTATION HORIZ ANTI FAST HORIZONTAL ORIGIN UR rectangular TYPE MARCCD !SIZE 4096 4096 HEADER 1 byte 4096 !LIMITS XMIN 0 XMAX 162.5 YMIN 0 YMAX 162.5 xscan 2048 yscan 2048 GAIN 0.3 Date: 2012-05-21
- MOSFLM_BEAMLINE_PARAMETERS: SYNCHROTRON POLARIZATION 0.92 DIVERGENCE 0.250 0.030 DISPERSION 0.00020 Date: 2012-05-21
- DC Date: 2012-01-13 Date: 2012-01-17
- Performed By: Hsiu-Ju (Jessica) Chiu Date: 2012-01-17
- Temperature (K): 100 Date: 2012-01-17
- Beamline: BL9-2 Date: 2012-01-17
- ImageDirectory: /data/jcsg/ssrl5/9_2/20120111/collection/GS12873A/170258/ Date: 2012-01-17
- Description: l3s1 Date: 2012-01-17
- Wavelength: 0.97927 Date: 2012-01-17
- Anomalous fprimv: -7.5 Date: 2012-01-17
- Anomalous fprprv: 5 Date: 2012-01-17
- DetectorMode: undefined Date: 2012-01-17
- Distance: 285.001 Date: 2012-01-17
- BeamCenter X: 162.5 Date: 2012-01-17
- BeamCenter Y: 162.5 Date: 2012-01-17
- ImagePrefix: 170258_2 Date: 2012-01-17
- ImageSuffix: mccd Date: 2012-01-17
- PhiDelta: 0.50 Date: 2012-01-17
- PhiStart: 196.0 Date: 2012-01-17
- FrameNumber start: 1 Date: 2012-01-17
- FrameNumber end: 180 Date: 2012-01-17
- Monochromatic_Laue: M Date: 2012-05-21
- Monochromator: double crystal Date: 2012-05-21
- Optics: double crystal monochromator Date: 2012-05-21
- Denzo Detector Format: ccd unsupported-m325 Date: 2012-05-21
- Denzo Detector Format xdispsize: 810 Date: 2012-05-21
- Denzo Beamline Parameters: [overload value 65535] [film rotation 90.0] air absorption length 3500 monochromator 0.87 cassette rotx 0.0 roty 0.0 rotz 0.00 radial offset 0.000 angular offset 0.000 Date: 2012-05-21
- Denzo XDisp Peaksize: 3 Date: 2012-05-21
- XDS Detector Parameters: DETECTOR=CCDCHESS MINIMUM_VALID_PIXEL_VALUE=0 OVERLOAD=65000 DIRECTION_OF_DETECTOR_X-AXIS= 1.0 0.0 0.0 DIRECTION_OF_DETECTOR_Y-AXIS= 0.0 1.0 0.0 !Half corner is ~1.2, Full CCD 1.4, 1.0 for no corner TRUSTED_REGION=0.0 1.2 NX=4096 NY=4096 QX=0.079346 QY=0.079346 Date: 2012-05-21
- XDS Beamline Parameters: POLARIZATION_PLANE_NORMAL= 0.0 1.0 0.0 INCIDENT_BEAM_DIRECTION=0.0 0.0 1.0 FRACTION_OF_POLARIZATION=0.92 !SSRL ! 0.5 for unpolarized beam AIR=0.001 !Air absorption coefficient of x-rays Date: 2012-05-21
- XDS Image Format: DIRECT TIFF Date: 2012-05-21
STAGE: Integration
-
Collection: 104509 Cell: 1 Date: 2012-01-17 Status: Success
Previous Location: Collection: 104508 Cell: 1
- Integration Log File: INTEGRATE.LP Date: 2012-01-17
- Integration Reflection File: INTEGRATE.HKL Date: 2012-01-17
- Integration Name: l1 Date: 2012-01-17
- Integration Comments: xds, I4, inflection point Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- Integration Program: XDS Date: 2012-01-17
- Program Version: December 29, 2011 Date: 2012-01-17
- Integration Date: 2012-01-17 Date: 2012-01-17
-
Collection: 104509 Cell: 2 Date: 2012-01-17 Status: Success
Previous Location: Collection: 104508 Cell: 2
- Integration Log File: INTEGRATE.LP Date: 2012-01-17
- Integration Reflection File: INTEGRATE.HKL Date: 2012-01-17
- Integration Name: l2 Date: 2012-01-17
- Integration Comments: xds, I4, remote wavelength Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- Integration Program: XDS Date: 2012-01-17
- Program Version: December 29, 2011 Date: 2012-01-17
- Integration Date: 2012-01-17 Date: 2012-01-17
-
Collection: 104509 Cell: 3 Date: 2012-01-17 Status: Success
Previous Location: Collection: 104508 Cell: 3
- Integration Log File: INTEGRATE.LP Date: 2012-01-17
- Integration Reflection File: INTEGRATE.HKL Date: 2012-01-17
- Integration Name: l3 Date: 2012-01-17
- Integration Comments: xds, I4, peak wavelength Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- Integration Program: XDS Date: 2012-01-17
- Program Version: December 29, 2011 Date: 2012-01-17
- Integration Date: 2012-01-17 Date: 2012-01-17
STAGE: Scaling
-
Collection: 104510 Cell: 1 Date: 2012-01-17 Status: Success
Previous Location: Collection: 104509 Cell: 1
- Scale Log File: XSCALE.LP Date: 2012-01-17
- Scale Reflection File: scale.mtz Date: 2012-01-17
- Scale Name: l1 Date: 2012-01-17
- Scale Comments: xscale, I4, inflection point Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- Unmerged HKL File: nomerge.sca Date: 2012-01-17
- Scaling Date: 2012-01-17 Date: 2012-01-17
-
Collection: 104510 Cell: 2 Date: 2012-01-17 Status: Success
Previous Location: Collection: 104509 Cell: 2
- Scale Log File: XSCALE.LP Date: 2012-01-17
- Scale Reflection File: scale.mtz Date: 2012-01-17
- Scale Name: l2 Date: 2012-01-17
- Scale Comments: xscale, I4, remote wavelength Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- Unmerged HKL File: nomerge.sca Date: 2012-01-17
- Scaling Date: 2012-01-17 Date: 2012-01-17
-
Collection: 104510 Cell: 3 Date: 2012-01-17 Status: Success
Previous Location: Collection: 104509 Cell: 3
- Scale Log File: XSCALE.LP Date: 2012-01-17
- Scale Reflection File: scale.mtz Date: 2012-01-17
- Scale Name: l3 Date: 2012-01-17
- Scale Comments: Xscale, I4, peak wavelength Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- Unmerged HKL File: nomerge.sca Date: 2012-01-17
- Scaling Date: 2012-01-17 Date: 2012-01-17
STAGE: Truncating
-
Collection: 104511 Cell: 1 Date: 2012-01-17 Status: Success
Previous Location: Collection: 104510 Cell: 1
- Truncate Name: l1 Date: 2012-01-17
- Truncate Comments: I41, 1 molecule/asu, inflection point Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- Truncate Log File: truncate.log Date: 2012-01-17
- Truncate Reflection File: truncate.mtz Date: 2012-01-17
- truncate program version: 6.2 Date: 2012-01-17
- Unique reflections overall: 171096 Date: 2012-01-17
- Wilson_Bfact: 51.662 Date: 2012-01-17
- Truncate Date: 2012-01-17 Date: 2012-01-17
- Cell A: 113.8690 Date: 2012-01-17
- Cell B: 113.8690 Date: 2012-01-17
- Cell C: 75.2130 Date: 2012-01-17
- Angle Alpha: 90.0000 Date: 2012-01-17
- Angle Beta: 90.0000 Date: 2012-01-17
- Angle Gamma: 90.0000 Date: 2012-01-17
- Unique Reflections: 21388 Date: 2012-01-17
- Resolution Range Low: 29.119 Date: 2012-01-17
- Resolution Range High: 2.299 Date: 2012-01-17
-
Collection: 104511 Cell: 2 Date: 2012-01-17 Status: Success
Previous Location: Collection: 104510 Cell: 2
- Truncate Name: l2 Date: 2012-01-17
- Truncate Comments: I41, 1 molecule/asu, remote wavelength Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- Truncate Log File: truncate.log Date: 2012-01-17
- Truncate Reflection File: truncate.mtz Date: 2012-01-17
- truncate program version: 6.2 Date: 2012-01-17
- Unique reflections overall: 171200 Date: 2012-01-17
- Wilson_Bfact: 52.286 Date: 2012-01-17
- Truncate Date: 2012-01-17 Date: 2012-01-17
- Cell A: 113.8920 Date: 2012-01-17
- Cell B: 113.8920 Date: 2012-01-17
- Cell C: 75.2190 Date: 2012-01-17
- Angle Alpha: 90.0000 Date: 2012-01-17
- Angle Beta: 90.0000 Date: 2012-01-17
- Angle Gamma: 90.0000 Date: 2012-01-17
- Unique Reflections: 21402 Date: 2012-01-17
- Resolution Range Low: 29.124 Date: 2012-01-17
- Resolution Range High: 2.299 Date: 2012-01-17
-
Collection: 104511 Cell: 3 Date: 2012-01-17 Status: Success
Previous Location: Collection: 104510 Cell: 3
- Truncate Name: l3 Date: 2012-01-17
- Truncate Comments: I41, 1 molecule/asu, peak wavelength Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- Truncate Log File: truncate.log Date: 2012-01-17
- Truncate Reflection File: truncate.mtz Date: 2012-01-17
- truncate program version: 6.2 Date: 2012-01-17
- Unique reflections overall: 144264 Date: 2012-01-17
- Wilson_Bfact: 54.926 Date: 2012-01-17
- Truncate Date: 2012-01-17 Date: 2012-01-17
- Cell A: 114.0340 Date: 2012-01-17
- Cell B: 114.0340 Date: 2012-01-17
- Cell C: 75.1710 Date: 2012-01-17
- Angle Alpha: 90.0000 Date: 2012-01-17
- Angle Beta: 90.0000 Date: 2012-01-17
- Angle Gamma: 90.0000 Date: 2012-01-17
- Unique Reflections: 18033 Date: 2012-01-17
- Resolution Range Low: 29.152 Date: 2012-01-17
- Resolution Range High: 2.440 Date: 2012-01-17
STAGE: Phasing
-
Collection: 104512 Cell: 1 Date: 2012-01-17 Status: Success
Previous Location: Collection: 104511 Cell: 1
Collection: 104511 Cell: 2
- Name of phasing run: sharp Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- Phasing Comments: Se sites were first identified in Shelx and then refined in Sharp. Phased with the first two wavelengths. Date: 2012-01-17
- Phasing reflection file: eden-unique.mtz Date: 2012-01-17
- Phasing PRT log: ha.pdb Date: 2012-01-17
- Phasing log file: sharp_log.mmcif Date: 2012-01-17
- Solution Type: MAD Date: 2012-01-17
- Reference Wavelength: 0.97949 Date: 2012-01-17
- Phasing Date: 2012-01-17 Date: 2012-01-17
STAGE: Density Modification
-
Collection: 104513 Cell: 1 Date: 2012-01-17 Status: Success
Previous Location: Collection: 104511 Cell: 1
Collection: 104512 Cell: 1
- Name of DM run: solomon Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- DM Comments: density modification with Solomon in Sharp Date: 2012-01-17
- DM reflection file: eden_flat_42.4pc.mtz Date: 2012-01-17
- DM log file: solomon_log.html Date: 2012-01-17
- DM Date: 2012-01-17 Date: 2012-01-17
STAGE: Tracing
-
Collection: 104514 Cell: 1 Date: 2012-01-17 Status: Solved Structure
Previous Location: Collection: 104511 Cell: 1
Collection: 104513 Cell: 1
Collection: 104512 Cell: 1
- Name of tracing run: warp Date: 2012-01-17
- Performed By: 80 Date: 2012-01-17
- Tracing Comments: 94% (356/380) traced and docked. R=0.191 sharp_xds/i41/nmol1/lambda12 Date: 2012-01-17
- Tracing program: ARP/wARP Date: 2012-01-17
- Tracing log file: eden_flat_42.4pc_warpNtrace_build.log Date: 2012-01-17
- Tracing reflection file: eden_flat_42.4pc_warpNtrace.mtz Date: 2012-01-17
- Tracing PDB: model_SHARP.2_wARP_42.4pc.pdb Date: 2012-01-17
- Tracing Program Version: 7.0.1 Date: 2012-01-17
- Tracing Date: 2012-01-17 Date: 2012-01-17
STAGE: Refining
-
Collection: 104581 Cell: 1 Date: 2012-01-20 Status: Success
Previous Location: Collection: 104514 Cell: 1
Collection: 104511 Cell: 2
Collection: 104513 Cell: 1
Collection: 104512 Cell: 1
- Name of refinement run: ref1 Date: 2012-01-20
- Performed By: 2793 Date: 2012-01-20
- REFINEMENT TARGET :: MAXIMUM LIKELIHOOD WITH PHASES Date: 2012-01-20
- RESOLUTION RANGE HIGH:: 2.30 Date: 2012-01-20
- DATA CUTOFF (SIGMA(F)) :: NONE Date: 2012-01-20
- COMPLETENESS (WORKING+TEST) (%) :: 99.45 Date: 2012-01-20
- NUMBER OF REFLECTIONS :: 20294 Date: 2012-01-20
- CROSS-VALIDATION METHOD :: THROUGHOUT Date: 2012-01-20
- FREE R VALUE TEST SET SELECTION :: RANDOM Date: 2012-01-20
- R VALUE (WORKING SET) :: 0.16731 Date: 2012-01-20
- FREE R VALUE :: 0.19722 Date: 2012-01-20
- FREE R VALUE TEST SET SIZE (%) :: 5.1 Date: 2012-01-20
- FREE R VALUE TEST SET COUNT :: 1097 Date: 2012-01-20
- TOTAL NUMBER OF BINS USED :: 20 Date: 2012-01-20
- BIN RESOLUTION RANGE HIGH (A) :: 2.300 Date: 2012-01-20
- BIN RESOLUTION RANGE LOW (A) :: 2.359 Date: 2012-01-20
- REFLECTIONS IN BIN (WORKING SET) :: 1430 Date: 2012-01-20
- BIN R VALUE (WORKING SET) :: 0.276 Date: 2012-01-20
- BIN FREE R VALUE :: 0.327 Date: 2012-01-20
- BIN FREE R VALUE TEST SET COUNT :: 87 Date: 2012-01-20
- MEAN B VALUE (OVERALL, A**2) :: 34.263 Date: 2012-01-20
- OVERALL ANISOTROPIC B VALUE B11 (A**2) :: -1.41 Date: 2012-01-20
- OVERALL ANISOTROPIC B VALUE B22 (A**2) :: -1.41 Date: 2012-01-20
- OVERALL ANISOTROPIC B VALUE B33 (A**2) :: 2.83 Date: 2012-01-20
- OVERALL ANISOTROPIC B VALUE B12 (A**2) :: 0.00 Date: 2012-01-20
- OVERALL ANISOTROPIC B VALUE B13 (A**2) :: 0.00 Date: 2012-01-20
- OVERALL ANISOTROPIC B VALUE B23 (A**2) :: 0.00 Date: 2012-01-20
- SPACE GROUP: I41 Date: 2012-01-20
- MAIN-CHAIN ANGLE RMS (A**2) :: 1.415 Date: 2012-01-20
- BOND LENGTHS RMS DEVIATIONS (A) :: 0.013 Date: 2012-01-20
- Refinement Log: submitted1.log Date: 2012-01-20
- Reflection File: submitted1.mtz Date: 2012-01-20
- PDB file: submitted1.pdb Date: 2012-01-20
- Program: REFMAC Date: 2012-01-20
- Version: 5.6.0117 Date: 2012-01-20
- Cell A: 113.892 Date: 2012-01-20
- Cell B: 113.892 Date: 2012-01-20
- Cell C: 75.219 Date: 2012-01-20
- Angle Alpha: 90.00 Date: 2012-01-20
- Angle Beta: 90.00 Date: 2012-01-20
- Angle Gamma: 90.00 Date: 2012-01-20
- ALL ATOMS: 2942 Date: 2012-01-20
- ESU BASED ON R VALUE: 0.230 Date: 2012-01-20
- ESU BASED ON FREE R VALUE: 0.176 Date: 2012-01-20
- ESU BASED ON MAXIMUM LIKELIHOOD: 0.135 Date: 2012-01-20
- ESU FOR B VALUE BASED ON MAXIMUM LIKELIHOOD: 11.302 Date: 2012-01-20
- CORRELATION COEFFICIENT FO-FC: 0.969 Date: 2012-01-20
- CORRELATION COEFFICIENT FO-FC FREE: 0.963 Date: 2012-01-20
- BOND LENGTHS REFINED ATOMS - LENGTH COUNT: 2886 Date: 2012-01-20
- BOND LENGTHS REFINED ATOMS - LENGTH WEIGHT: 0.020 Date: 2012-01-20
- BOND ANGLES REFINED ATOMS - ANGLE WEIGHT: 1.959 Date: 2012-01-20
- CHIRAL-CENTER RESTRAINTS RMS: 0.077 Date: 2012-01-20
- TORSION ANGLES, PERIOD COUNT: 367::132::473::7 Date: 2012-01-20
- TORSION ANGLES, PERIOD RMS: 5.964::34.987::14.705::11.286 Date: 2012-01-20
- TORSION ANGLES, PERIOD WEIGHT: 5.000::26.288::15.000::15.000 Date: 2012-01-20
- CHIRAL-CENTER RESTRAINTS COUNT: 435 Date: 2012-01-20
- CHIRAL-CENTER RESTRAINTS WEIGHT: 0.200 Date: 2012-01-20
- GENERAL PLANES REFINED ATOMS COUNT: 3253 Date: 2012-01-20
- GENERAL PLANES REFINED ATOMS RMS: 0.006 Date: 2012-01-20
- GENERAL PLANES REFINED ATOMS WEIGHT: 0.021 Date: 2012-01-20
- METHOD USED: BABINET MODEL WITH MASK Date: 2012-01-20
- VDW PROBE RADIUS: 1.20 Date: 2012-01-20
- ION PROBE RADIUS: 0.80 Date: 2012-01-20
- SHRINKAGE RADIUS: 0.80 Date: 2012-01-20
- Refinement Date : 2012-01-20 Date: 2012-01-20
- Refinement Technical Note: qc_check1.html Date: 2012-01-20
- Structure Refinement Summary: submitted1.txt Date: 2012-01-20
- Matthews Coef: 2.95 Date: 2012-01-22
- Solvent Percentage: 58.30 Date: 2012-01-22
-
Collection: 104581 Cell: 2 Date: 2012-01-24 Status: Success
Previous Location: Collection: 104514 Cell: 1
Collection: 104511 Cell: 2
Collection: 104513 Cell: 1
Collection: 104512 Cell: 1
Collection: 104581 Cell: 1
- Name of refinement run: ref2 Date: 2012-01-24
- Performed By: 2793 Date: 2012-01-24
- REFINEMENT TARGET :: MAXIMUM LIKELIHOOD WITH PHASES Date: 2012-01-24
- RESOLUTION RANGE HIGH:: 2.30 Date: 2012-01-24
- DATA CUTOFF (SIGMA(F)) :: NONE Date: 2012-01-24
- COMPLETENESS (WORKING+TEST) (%) :: 99.45 Date: 2012-01-24
- NUMBER OF REFLECTIONS :: 20294 Date: 2012-01-24
- CROSS-VALIDATION METHOD :: THROUGHOUT Date: 2012-01-24
- FREE R VALUE TEST SET SELECTION :: RANDOM Date: 2012-01-24
- R VALUE (WORKING SET) :: 0.16165 Date: 2012-01-24
- FREE R VALUE :: 0.19269 Date: 2012-01-24
- FREE R VALUE TEST SET SIZE (%) :: 5.1 Date: 2012-01-24
- FREE R VALUE TEST SET COUNT :: 1097 Date: 2012-01-24
- TOTAL NUMBER OF BINS USED :: 20 Date: 2012-01-24
- BIN RESOLUTION RANGE HIGH (A) :: 2.300 Date: 2012-01-24
- BIN RESOLUTION RANGE LOW (A) :: 2.359 Date: 2012-01-24
- REFLECTIONS IN BIN (WORKING SET) :: 1430 Date: 2012-01-24
- BIN R VALUE (WORKING SET) :: 0.265 Date: 2012-01-24
- BIN FREE R VALUE :: 0.315 Date: 2012-01-24
- BIN FREE R VALUE TEST SET COUNT :: 87 Date: 2012-01-24
- MEAN B VALUE (OVERALL, A**2) :: 47.372 Date: 2012-01-24
- OVERALL ANISOTROPIC B VALUE B11 (A**2) :: -1.40 Date: 2012-01-24
- OVERALL ANISOTROPIC B VALUE B22 (A**2) :: -1.40 Date: 2012-01-24
- OVERALL ANISOTROPIC B VALUE B33 (A**2) :: 2.81 Date: 2012-01-24
- OVERALL ANISOTROPIC B VALUE B12 (A**2) :: 0.00 Date: 2012-01-24
- OVERALL ANISOTROPIC B VALUE B13 (A**2) :: 0.00 Date: 2012-01-24
- OVERALL ANISOTROPIC B VALUE B23 (A**2) :: 0.00 Date: 2012-01-24
- SPACE GROUP: I41 Date: 2012-01-24
- MAIN-CHAIN ANGLE RMS (A**2) :: 1.697 Date: 2012-01-24
- BOND LENGTHS RMS DEVIATIONS (A) :: 0.017 Date: 2012-01-24
- Refinement Log: submitted2.log Date: 2012-01-24
- Reflection File: submitted2.mtz Date: 2012-01-24
- PDB file: submitted2.pdb Date: 2012-01-24
- Program: REFMAC Date: 2012-01-24
- Version: 5.6.0117 Date: 2012-01-24
- Cell A: 113.892 Date: 2012-01-24
- Cell B: 113.892 Date: 2012-01-24
- Cell C: 75.219 Date: 2012-01-24
- Angle Alpha: 90.00 Date: 2012-01-24
- Angle Beta: 90.00 Date: 2012-01-24
- Angle Gamma: 90.00 Date: 2012-01-24
- ALL ATOMS: 2955 Date: 2012-01-24
- ESU BASED ON R VALUE: 0.224 Date: 2012-01-24
- ESU BASED ON FREE R VALUE: 0.172 Date: 2012-01-24
- ESU BASED ON MAXIMUM LIKELIHOOD: 0.134 Date: 2012-01-24
- ESU FOR B VALUE BASED ON MAXIMUM LIKELIHOOD: 11.160 Date: 2012-01-24
- CORRELATION COEFFICIENT FO-FC: 0.971 Date: 2012-01-24
- CORRELATION COEFFICIENT FO-FC FREE: 0.964 Date: 2012-01-24
- BOND LENGTHS REFINED ATOMS - LENGTH COUNT: 2886 Date: 2012-01-24
- BOND LENGTHS REFINED ATOMS - LENGTH WEIGHT: 0.020 Date: 2012-01-24
- BOND ANGLES REFINED ATOMS - ANGLE WEIGHT: 1.959 Date: 2012-01-24
- CHIRAL-CENTER RESTRAINTS RMS: 0.095 Date: 2012-01-24
- TORSION ANGLES, PERIOD COUNT: 367::132::473::7 Date: 2012-01-24
- TORSION ANGLES, PERIOD RMS: 6.147::35.318::15.491::12.948 Date: 2012-01-24
- TORSION ANGLES, PERIOD WEIGHT: 5.000::26.288::15.000::15.000 Date: 2012-01-24
- CHIRAL-CENTER RESTRAINTS COUNT: 435 Date: 2012-01-24
- CHIRAL-CENTER RESTRAINTS WEIGHT: 0.200 Date: 2012-01-24
- GENERAL PLANES REFINED ATOMS COUNT: 3253 Date: 2012-01-24
- GENERAL PLANES REFINED ATOMS RMS: 0.008 Date: 2012-01-24
- GENERAL PLANES REFINED ATOMS WEIGHT: 0.021 Date: 2012-01-24
- METHOD USED: BABINET MODEL WITH MASK Date: 2012-01-24
- VDW PROBE RADIUS: 1.20 Date: 2012-01-24
- ION PROBE RADIUS: 0.80 Date: 2012-01-24
- SHRINKAGE RADIUS: 0.80 Date: 2012-01-24
- Refinement Date : 2012-01-24 Date: 2012-01-24
- Refinement Technical Note: qc_check2.html Date: 2012-01-24
- Structure Refinement Summary: submitted2.txt Date: 2012-01-24
- Matthews Coef: 2.95 Date: 2012-01-29
- Solvent Percentage: 58.30 Date: 2012-01-29
-
Collection: 104581 Cell: 3 Date: 2012-03-23 Status: Success
Previous Location: Collection: 104514 Cell: 1
Collection: 104511 Cell: 2
Collection: 104513 Cell: 1
Collection: 104512 Cell: 1
Collection: 104581 Cell: 2
- Name of refinement run: ref3 Date: 2012-03-23
- Performed By: 2793 Date: 2012-03-23
- REFINEMENT TARGET :: MAXIMUM LIKELIHOOD WITH PHASES Date: 2012-03-23
- RESOLUTION RANGE HIGH:: 2.30 Date: 2012-03-23
- DATA CUTOFF (SIGMA(F)) :: NONE Date: 2012-03-23
- COMPLETENESS (WORKING+TEST) (%) :: 99.45 Date: 2012-03-23
- NUMBER OF REFLECTIONS :: 20294 Date: 2012-03-23
- CROSS-VALIDATION METHOD :: THROUGHOUT Date: 2012-03-23
- FREE R VALUE TEST SET SELECTION :: RANDOM Date: 2012-03-23
- R VALUE (WORKING SET) :: 0.16263 Date: 2012-03-23
- FREE R VALUE :: 0.19263 Date: 2012-03-23
- FREE R VALUE TEST SET SIZE (%) :: 5.1 Date: 2012-03-23
- FREE R VALUE TEST SET COUNT :: 1097 Date: 2012-03-23
- TOTAL NUMBER OF BINS USED :: 20 Date: 2012-03-23
- BIN RESOLUTION RANGE HIGH (A) :: 2.300 Date: 2012-03-23
- BIN RESOLUTION RANGE LOW (A) :: 2.359 Date: 2012-03-23
- REFLECTIONS IN BIN (WORKING SET) :: 1430 Date: 2012-03-23
- BIN R VALUE (WORKING SET) :: 0.265 Date: 2012-03-23
- BIN FREE R VALUE :: 0.326 Date: 2012-03-23
- BIN FREE R VALUE TEST SET COUNT :: 87 Date: 2012-03-23
- MEAN B VALUE (OVERALL, A**2) :: 47.377 Date: 2012-03-23
- OVERALL ANISOTROPIC B VALUE B11 (A**2) :: -1.40 Date: 2012-03-23
- OVERALL ANISOTROPIC B VALUE B22 (A**2) :: -1.40 Date: 2012-03-23
- OVERALL ANISOTROPIC B VALUE B33 (A**2) :: 2.79 Date: 2012-03-23
- OVERALL ANISOTROPIC B VALUE B12 (A**2) :: 0.00 Date: 2012-03-23
- OVERALL ANISOTROPIC B VALUE B13 (A**2) :: 0.00 Date: 2012-03-23
- OVERALL ANISOTROPIC B VALUE B23 (A**2) :: 0.00 Date: 2012-03-23
- SPACE GROUP: I41 Date: 2012-03-23
- MAIN-CHAIN ANGLE RMS (A**2) :: 1.732 Date: 2012-03-23
- BOND LENGTHS RMS DEVIATIONS (A) :: 0.017 Date: 2012-03-23
- Refinement Log: submitted3.log Date: 2012-03-23
- Reflection File: submitted3.mtz Date: 2012-03-23
- PDB file: submitted3.pdb Date: 2012-03-23
- Program: REFMAC Date: 2012-03-23
- Version: 5.6.0117 Date: 2012-03-23
- Cell A: 113.892 Date: 2012-03-23
- Cell B: 113.892 Date: 2012-03-23
- Cell C: 75.219 Date: 2012-03-23
- Angle Alpha: 90.00 Date: 2012-03-23
- Angle Beta: 90.00 Date: 2012-03-23
- Angle Gamma: 90.00 Date: 2012-03-23
- ALL ATOMS: 2958 Date: 2012-03-23
- ESU BASED ON R VALUE: 0.225 Date: 2012-03-23
- ESU BASED ON FREE R VALUE: 0.172 Date: 2012-03-23
- ESU BASED ON MAXIMUM LIKELIHOOD: 0.134 Date: 2012-03-23
- ESU FOR B VALUE BASED ON MAXIMUM LIKELIHOOD: 11.187 Date: 2012-03-23
- CORRELATION COEFFICIENT FO-FC: 0.971 Date: 2012-03-23
- CORRELATION COEFFICIENT FO-FC FREE: 0.964 Date: 2012-03-23
- BOND LENGTHS REFINED ATOMS - LENGTH COUNT: 2900 Date: 2012-03-23
- BOND LENGTHS REFINED ATOMS - LENGTH WEIGHT: 0.020 Date: 2012-03-23
- BOND ANGLES REFINED ATOMS - ANGLE WEIGHT: 1.959 Date: 2012-03-23
- CHIRAL-CENTER RESTRAINTS RMS: 0.094 Date: 2012-03-23
- TORSION ANGLES, PERIOD COUNT: 367::132::473::7 Date: 2012-03-23
- TORSION ANGLES, PERIOD RMS: 6.253::35.531::15.612::12.827 Date: 2012-03-23
- TORSION ANGLES, PERIOD WEIGHT: 5.000::26.288::15.000::15.000 Date: 2012-03-23
- CHIRAL-CENTER RESTRAINTS COUNT: 435 Date: 2012-03-23
- CHIRAL-CENTER RESTRAINTS WEIGHT: 0.200 Date: 2012-03-23
- GENERAL PLANES REFINED ATOMS COUNT: 3253 Date: 2012-03-23
- GENERAL PLANES REFINED ATOMS RMS: 0.008 Date: 2012-03-23
- GENERAL PLANES REFINED ATOMS WEIGHT: 0.021 Date: 2012-03-23
- METHOD USED: BABINET MODEL WITH MASK Date: 2012-03-23
- VDW PROBE RADIUS: 1.20 Date: 2012-03-23
- ION PROBE RADIUS: 0.80 Date: 2012-03-23
- SHRINKAGE RADIUS: 0.80 Date: 2012-03-23
- Refinement Date : 2012-03-23 Date: 2012-03-23
- Refinement Technical Note: qc_check3.html Date: 2012-03-23
- Structure Refinement Summary: submitted3.txt Date: 2012-03-23
- Matthews Coef: 2.95 Date: 2012-03-25
- Solvent Percentage: 58.30 Date: 2012-03-25
STAGE: QC
-
Collection: 104642 Cell: 1 Date: 2012-01-24 Status: QC Return
Previous Location: Collection: 104581 Cell: 1
- Performed By: 79 Date: 2012-01-24
- QC Log: qca.txt Date: 2012-01-24
- QC Date: 2012-01-24 Date: 2012-01-24
- QC Set Name: qc1 Date: 2012-01-24
-
Collection: 104642 Cell: 2 Date: 2012-01-24 Status: Success
Previous Location: Collection: 104581 Cell: 2
- Performed By: 79 Date: 2012-01-24
- QC Date: 2012-01-24 Date: 2012-01-24
- QC Set Name: qc2 Date: 2012-01-24
STAGE: Validation
-
Collection: 104643 Cell: 1 Date: 2012-03-26 Status: Success
Previous Location: Collection: 104642 Cell: 2
STAGE: PDB Deposition
-
Collection: 106961 Cell: 1 Date: 2012-03-26 Status: Success
Previous Location: Collection: 104643 Cell: 1
- PDB ID: 4ecg Date: 2012-03-26
- RCSB ID: rcsb071442 Date: 2012-03-26
- PDB File: gs12873a.pdb Date: 2012-03-26
- Coordinate mmCIF File: gs12873a_coor.mmCIF.gz Date: 2012-03-26
- Structure factor mmCIF File: gs12873a_sf.mmCIF.gz Date: 2012-03-26
- Deposition Date: 2012-03-26 Date: 2012-03-26