LOADING...
Target ID: 396550
Target Name:PX9961L  Protein Accession:YP_001298690.1  Local Accession: PX9961L  cDNA Accession:REF|NC_009614.1|:C1841838-1840231  PSCA PDB:3jys

Hover over nodes to see experimental data. Click on nodes to go to that point in the data below.

Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19
1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19
1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19
1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19
1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19
1 2 3 4 6 7 8 9
1 2 4 5 6
5 6
1 3 4
1
1 3
1 3
1 3
1 3
1 3
1 3
3
1
Name: Putative outer membrane protein, probably involved in nutrient binding.  Start Position: 38  End Position: 535
GNF Target Alias: HK100:SpeedET-PX9961L-bvu-535-38-535  Sequence Type: SEGMENT  Residues: 498
DNA Length: 1494  Molecular Weight: 56279.75  Isoelectric Point: 4.72
Epsilon 280: 117230  Gravy Index: -0.48  Species: B. vulgatus ATCC 8482
Activated: 1  Alanine Absolute: 43  Alanine Relative: 0.0863
Arginine Absolute: 23  Arginine Relative: 0.0462  Asparagine Absolute: 37
Asparagine Relative: 0.0743  Aspartic Acid Absolute: 35  Aspartic Acid Relative: 0.0703
Cysteine Absolute: 5  Cysteine Relative: 0.0100  Glutamic Acid Absolute: 37
Glutamic Acid Relative: 0.0743  Glutamine Absolute: 14  Glutamine Relative: 0.0281
Glycine Absolute: 37  Glycine Relative: 0.0743  Histidine Absolute: 4
Histidine Relative: 0.0080  Isoleucine Absolute: 31  Isoleucine Relative: 0.0622
Leucine Absolute: 37  Leucine Relative: 0.0743  Lysine Absolute: 26
Lysine Relative: 0.0522  Methionine Absolute: 9  Methionine Relative: 0.0181
Phenylalanine Absolute: 20  Phenylalanine Relative: 0.0402  Proline Absolute: 18
Proline Relative: 0.0361  Serine Absolute: 31  Serine Relative: 0.0622
Threonine Absolute: 26  Threonine Relative: 0.0522  Tryptophan Absolute: 14
Tryptophan Relative: 0.0281  Tyrosine Absolute: 27  Tyrosine Relative: 0.0542
Valine Absolute: 24  Valine Relative: 0.0482  Project: GNF Autogenerated
Selection Date: 2008-07-14  PFAM: pdb file loaded for [Hinxton #114135]  
ProposalRelationshipOwnerLab Name
78JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression

STAGE: Protein Purification

STAGE: Crystallization

STAGE: Crystal Hit

STAGE: SDC Receiving

STAGE: Screening

STAGE: Data Collection

STAGE: Integration

STAGE: Scaling

STAGE: Truncating

STAGE: Phasing

STAGE: Density Modification

STAGE: Tracing

STAGE: Refining

STAGE: QC

STAGE: Validation

STAGE: PDB Deposition
Contact Webmaster JCSG Menu