LOADING...
Target ID: 397279
Target Name:MI15740X  Protein Accession:YP_611455.1  Local Accession: MI15740X  cDNA Accession:REF|NC_008043.1|:C216363-215137  PSCA PDB:3n0q

Hover over nodes to see experimental data. Click on nodes to go to that point in the data below.

Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59
32 33 34 35 36 37 38 39 1 2 3 5 6 7 8
10 11 12 13 14 15 16
1 2 3 4 5 6 8 9 10 11 12 13 14
1 2 3 5 6 7
1 2 3 5 6 7
1 2 3 5 6 7
1 2 3 5 6 7
1 2 3 5 6 7
1 2 5 6 7
4 5 5
1 1
Name: Putative aromatic-ring hydroxylating dioxygenase [with two scop folds: ISP domain & Ring hydroxylating alpha subunit catalytic domain]  Start Position: 1  End Position: 408
GNF Target Alias: HK100:SpeedET-MI15740X-sis-408-1-408  Sequence Type: COMPLETE  Residues: 408
DNA Length: 1224  Molecular Weight: 46088.31  Isoelectric Point: 5.72
Epsilon 280: 77350  Gravy Index: -0.44  Species: Silicibacter sp. TM1040
Activated: 1  Alanine Absolute: 35  Alanine Relative: 0.0858
Arginine Absolute: 24  Arginine Relative: 0.0588  Asparagine Absolute: 20
Asparagine Relative: 0.0490  Aspartic Acid Absolute: 23  Aspartic Acid Relative: 0.0564
Cysteine Absolute: 10  Cysteine Relative: 0.0245  Glutamic Acid Absolute: 31
Glutamic Acid Relative: 0.0760  Glutamine Absolute: 12  Glutamine Relative: 0.0294
Glycine Absolute: 29  Glycine Relative: 0.0711  Histidine Absolute: 20
Histidine Relative: 0.0490  Isoleucine Absolute: 16  Isoleucine Relative: 0.0392
Leucine Absolute: 30  Leucine Relative: 0.0735  Lysine Absolute: 15
Lysine Relative: 0.0368  Methionine Absolute: 6  Methionine Relative: 0.0147
Phenylalanine Absolute: 18  Phenylalanine Relative: 0.0441  Proline Absolute: 22
Proline Relative: 0.0539  Serine Absolute: 21  Serine Relative: 0.0515
Threonine Absolute: 22  Threonine Relative: 0.0539  Tryptophan Absolute: 10
Tryptophan Relative: 0.0245  Tyrosine Absolute: 15  Tyrosine Relative: 0.0368
Valine Absolute: 29  Valine Relative: 0.0711  Project: Mega families assigned to JCSG 08-2008
Selection Date: 2008-09-26  PFAM: pdb file loaded for [Hinxton #161097]  
ProposalRelationshipOwnerLab Name
79JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression

STAGE: Protein Purification

STAGE: Crystallization

STAGE: Crystal Hit

STAGE: SDC Receiving

STAGE: Screening

STAGE: Data Collection

STAGE: Integration

STAGE: Scaling

STAGE: Truncating

STAGE: Phasing

STAGE: Density Modification

STAGE: Tracing

STAGE: Refining

STAGE: QC

STAGE: Validation

STAGE: PDB Deposition
Contact Webmaster JCSG Menu