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Target ID: 416713
Target Name:SP13834A  Protein Accession:ZP_02067073.1  Local Accession: SP13834A  cDNA Accession:REF|NZ_DS264582.1|:405721-406719  PSCA PDB:3pay

Hover over nodes to see experimental data. Click on nodes to go to that point in the data below.

Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
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1 1
Name: Putative adhesin  Start Position: 20  End Position: 332
GNF Target Alias: HK100:SpeedET-SP13834A-bot-332-20-332  Sequence Type: SEGMENT  Residues: 313
DNA Length: 939  Molecular Weight: 35666.39  Isoelectric Point: 4.69
Epsilon 280: 60850  Gravy Index: -0.24  Species: Bacteroides ovatus
Activated: 1  Alanine Absolute: 12  Alanine Relative: 0.0383
Arginine Absolute: 15  Arginine Relative: 0.0479  Asparagine Absolute: 20
Asparagine Relative: 0.0639  Aspartic Acid Absolute: 20  Aspartic Acid Relative: 0.0639
Cysteine Absolute: 2  Cysteine Relative: 0.0064  Glutamic Acid Absolute: 23
Glutamic Acid Relative: 0.0735  Glutamine Absolute: 10  Glutamine Relative: 0.0319
Glycine Absolute: 23  Glycine Relative: 0.0735  Histidine Absolute: 5
Histidine Relative: 0.0160  Isoleucine Absolute: 13  Isoleucine Relative: 0.0415
Leucine Absolute: 31  Leucine Relative: 0.0990  Lysine Absolute: 11
Lysine Relative: 0.0351  Methionine Absolute: 7  Methionine Relative: 0.0224
Phenylalanine Absolute: 16  Phenylalanine Relative: 0.0511  Proline Absolute: 12
Proline Relative: 0.0383  Serine Absolute: 20  Serine Relative: 0.0639
Threonine Absolute: 20  Threonine Relative: 0.0639  Tryptophan Absolute: 7
Tryptophan Relative: 0.0224  Tyrosine Absolute: 15  Tyrosine Relative: 0.0479
Valine Absolute: 31  Valine Relative: 0.0990  Project: GNF Autogenerated
Selection Date: 2009-11-12  PFAM: submit  
ProposalRelationshipOwnerLab Name
121Collaborator CNT# 164NakayamaDr. Koji Nakayama
87JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression

STAGE: Protein Purification

STAGE: Crystallization

STAGE: Crystal Hit

STAGE: SDC Receiving