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Target ID: 416788
Target Name:SP16874B  Protein Accession:ZP_02064699.1  Local Accession: SP16874B  cDNA Accession:REF|NZ_DS264563.1|:C81672-80470  PSCA PDB:3nfvPDB:3nnb

Hover over nodes to see experimental data. Click on nodes to go to that point in the data below.

Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
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1 1
Name: Alginate lyase  Start Position: 20  End Position: 400
GNF Target Alias: HK100:SpeedET-SP16874B-bot-400-20-400  Sequence Type: SEGMENT  Residues: 381
DNA Length: 1143  Molecular Weight: 43140.18  Isoelectric Point: 8.49
Epsilon 280: 72310  Gravy Index: -0.55  Species: Bacteroides ovatus
Activated: 1  Alanine Absolute: 38  Alanine Relative: 0.0997
Arginine Absolute: 14  Arginine Relative: 0.0367  Asparagine Absolute: 13
Asparagine Relative: 0.0341  Aspartic Acid Absolute: 26  Aspartic Acid Relative: 0.0682
Cysteine Absolute: 2  Cysteine Relative: 0.0052  Glutamic Acid Absolute: 21
Glutamic Acid Relative: 0.0551  Glutamine Absolute: 19  Glutamine Relative: 0.0499
Glycine Absolute: 24  Glycine Relative: 0.0630  Histidine Absolute: 5
Histidine Relative: 0.0131  Isoleucine Absolute: 19  Isoleucine Relative: 0.0499
Leucine Absolute: 32  Leucine Relative: 0.0840  Lysine Absolute: 36
Lysine Relative: 0.0945  Methionine Absolute: 17  Methionine Relative: 0.0446
Phenylalanine Absolute: 13  Phenylalanine Relative: 0.0341  Proline Absolute: 22
Proline Relative: 0.0577  Serine Absolute: 17  Serine Relative: 0.0446
Threonine Absolute: 25  Threonine Relative: 0.0656  Tryptophan Absolute: 8
Tryptophan Relative: 0.0210  Tyrosine Absolute: 19  Tyrosine Relative: 0.0499
Valine Absolute: 11  Valine Relative: 0.0289  Project: GNF Autogenerated
Selection Date: 2009-11-12  PFAM: submit  
ProposalRelationshipOwnerLab Name
87JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression

STAGE: Protein Purification

STAGE: Crystallization

STAGE: Crystal Hit