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Target ID: 416854
Target Name:SP0409AA  Protein Accession:ZP_02041710.1  Local Accession: SP0409AA  cDNA Accession:REF|NZ_AAYG02000018.1|:C138574-137735  PSCA PDB:3nyy

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Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 42
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 2
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 2
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 2
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 2
1 2 3 4 5 6 7 8 9 10 11 12 13 14 16 17 18 19 20 21 22 23 24 25 26 27 28 29
1 28 29
5 6 1 2 3 4 5
1 2 4 5
1 3
1 3
1 3
1 3
1 3
1 3
3
1
Name: putative glycyl-glycine endopeptidase lytM  Start Position: 29  End Position: 279
GNF Target Alias: HK100:SpeedET-SP0409AA-rgn-279-29-279  Sequence Type: SEGMENT  Residues: 251
DNA Length: 753  Molecular Weight: 28609.68  Isoelectric Point: 5.67
Epsilon 280: 66810  Gravy Index: -0.64  Species: Ruminococcus gnavus ATCC 29149
Activated: 1  Alanine Absolute: 13  Alanine Relative: 0.0518
Arginine Absolute: 15  Arginine Relative: 0.0598  Asparagine Absolute: 7
Asparagine Relative: 0.0279  Aspartic Acid Absolute: 16  Aspartic Acid Relative: 0.0637
Cysteine Absolute: 2  Cysteine Relative: 0.0080  Glutamic Acid Absolute: 17
Glutamic Acid Relative: 0.0677  Glutamine Absolute: 11  Glutamine Relative: 0.0438
Glycine Absolute: 27  Glycine Relative: 0.1076  Histidine Absolute: 4
Histidine Relative: 0.0159  Isoleucine Absolute: 9  Isoleucine Relative: 0.0359
Leucine Absolute: 14  Leucine Relative: 0.0558  Lysine Absolute: 14
Lysine Relative: 0.0558  Methionine Absolute: 6  Methionine Relative: 0.0239
Phenylalanine Absolute: 9  Phenylalanine Relative: 0.0359  Proline Absolute: 15
Proline Relative: 0.0598  Serine Absolute: 14  Serine Relative: 0.0558
Threonine Absolute: 13  Threonine Relative: 0.0518  Tryptophan Absolute: 7
Tryptophan Relative: 0.0279  Tyrosine Absolute: 19  Tyrosine Relative: 0.0757
Valine Absolute: 19  Valine Relative: 0.0757  Project: GNF Autogenerated
Selection Date: 2009-11-12  PFAM: submit  
ProposalRelationshipOwnerLab Name
87JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression

STAGE: Protein Purification

STAGE: Crystallization

STAGE: Crystal Hit

STAGE: SDC Receiving

STAGE: Screening

STAGE: Data Collection

STAGE: Integration

STAGE: Scaling

STAGE: Truncating

STAGE: Phasing

STAGE: Density Modification

STAGE: Tracing

STAGE: Refining

STAGE: QC

STAGE: Validation

STAGE: PDB Deposition
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