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Target ID: 417041
Target Name:SP13489F  Protein Accession:ZP_02064579.1  Local Accession: SP13489F  cDNA Accession:REF|NZ_DS264554.1|:C49384-47810  PSCA PDB:4jrf

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Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
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Name: a putative cell adhesion protein, fimbriae like protein, PF08842 family  Start Position: 18  End Position: 524
GNF Target Alias: PB1:SpeedET-SP13489F-bot-524-18-524  Sequence Type: SEGMENT  Residues: 507
DNA Length: 1521  Molecular Weight: 53607.72  Isoelectric Point: 4.45
Epsilon 280: 68300  Gravy Index: -0.17  Species: Bacteroides ovatus
Activated: 1  Alanine Absolute: 68  Alanine Relative: 0.1341
Arginine Absolute: 8  Arginine Relative: 0.0158  Asparagine Absolute: 27
Asparagine Relative: 0.0533  Aspartic Acid Absolute: 41  Aspartic Acid Relative: 0.0809
Cysteine Absolute: 7  Cysteine Relative: 0.0138  Glutamic Acid Absolute: 21
Glutamic Acid Relative: 0.0414  Glutamine Absolute: 17  Glutamine Relative: 0.0335
Glycine Absolute: 40  Glycine Relative: 0.0789  Histidine Absolute: 5
Histidine Relative: 0.0099  Isoleucine Absolute: 18  Isoleucine Relative: 0.0355
Leucine Absolute: 30  Leucine Relative: 0.0592  Lysine Absolute: 27
Lysine Relative: 0.0533  Methionine Absolute: 11  Methionine Relative: 0.0217
Phenylalanine Absolute: 14  Phenylalanine Relative: 0.0276  Proline Absolute: 21
Proline Relative: 0.0414  Serine Absolute: 30  Serine Relative: 0.0592
Threonine Absolute: 50  Threonine Relative: 0.0986  Tryptophan Absolute: 7
Tryptophan Relative: 0.0138  Tyrosine Absolute: 20  Tyrosine Relative: 0.0394
Valine Absolute: 45  Valine Relative: 0.0888  Project: GNF Autogenerated
Selection Date: 2009-11-12  PFAM: submit  
ProposalRelationshipOwnerLab Name
121Collaborator CNT# 164NakayamaDr. Koji Nakayama
87JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression

STAGE: Protein Purification

STAGE: Crystallization

STAGE: Crystal Hit

STAGE: SDC Receiving

STAGE: Screening

STAGE: Data Collection

STAGE: Integration

STAGE: Scaling

STAGE: Truncating

STAGE: Phasing

STAGE: Density Modification

STAGE: Tracing

STAGE: Refining

STAGE: QC

STAGE: Validation

STAGE: PDB Deposition
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