LOADING...
Target ID: 417106
Target Name:SP17038B  Protein Accession:ZP_02067969.1  Local Accession: SP17038B  cDNA Accession:REF|NZ_DS264584.1|:430464-431426  PSCA PDB:3ufi

Hover over nodes to see experimental data. Click on nodes to go to that point in the data below.

Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
1 2 3 4 5 6 7 8 9 10 11 13 14 15 16 17 18 19 20 21 22 23 24 1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19
1 2 3 4 5 6 7 8 9 10 11 13 14 15 16 17 18 19 20 21 22 23 24 1 2 3 4 5 19
23 24 1 2 3 4
1 2 4 5
1 2 4 5
1 2 4 5
1 2 4 5
1 2 4 5
1 2 4 5
1 2 4 5
1 2 4 5
4 5
1 1
Name: Putative cell adhesion protein, fimbrial protein, major fimbrial subunit protein (FimA), prealbumin-like fold  Start Position: 25  End Position: 320
GNF Target Alias: HK100:SpeedET-SP17038B-bot-320-25-320  Sequence Type: SEGMENT  Residues: 296
DNA Length: 888  Molecular Weight: 32385.15  Isoelectric Point: 4.43
Epsilon 280: 28880  Gravy Index: -0.47  Species: Bacteroides ovatus
Activated: 1  Alanine Absolute: 28  Alanine Relative: 0.0946
Arginine Absolute: 8  Arginine Relative: 0.0270  Asparagine Absolute: 22
Asparagine Relative: 0.0743  Aspartic Acid Absolute: 19  Aspartic Acid Relative: 0.0642
Cysteine Absolute: 0  Cysteine Relative: 0.0000  Glutamic Acid Absolute: 27
Glutamic Acid Relative: 0.0912  Glutamine Absolute: 11  Glutamine Relative: 0.0372
Glycine Absolute: 22  Glycine Relative: 0.0743  Histidine Absolute: 2
Histidine Relative: 0.0068  Isoleucine Absolute: 18  Isoleucine Relative: 0.0608
Leucine Absolute: 14  Leucine Relative: 0.0473  Lysine Absolute: 16
Lysine Relative: 0.0541  Methionine Absolute: 8  Methionine Relative: 0.0270
Phenylalanine Absolute: 10  Phenylalanine Relative: 0.0338  Proline Absolute: 12
Proline Relative: 0.0405  Serine Absolute: 15  Serine Relative: 0.0507
Threonine Absolute: 28  Threonine Relative: 0.0946  Tryptophan Absolute: 2
Tryptophan Relative: 0.0068  Tyrosine Absolute: 12  Tyrosine Relative: 0.0405
Valine Absolute: 22  Valine Relative: 0.0743  Project: GNF Autogenerated
Selection Date: 2009-11-12  PFAM: submit  
ProposalRelationshipOwnerLab Name
121Collaborator CNT# 164NakayamaDr. Koji Nakayama
87JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression

STAGE: Protein Purification

STAGE: Crystallization

STAGE: Crystal Hit

STAGE: SDC Receiving

STAGE: Screening

STAGE: Data Collection

STAGE: Integration

STAGE: Scaling

STAGE: Truncating

STAGE: Phasing

STAGE: Density Modification

STAGE: Tracing

STAGE: Refining

STAGE: QC

STAGE: Validation

STAGE: PDB Deposition
Contact Webmaster JCSG Menu