LOADING...
Target ID: 419184
Target Name:SP13677A  Protein Accession:ZP_02032405.1  Local Accession: SP13677A  cDNA Accession:REF|NZ_DS264541.1|:159962-160876  PSCA PDB:4e5v

Hover over nodes to see experimental data. Click on nodes to go to that point in the data below.

Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114
2 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112
2 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112
2 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112
2 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104
1 2 3 99 100 101 102 103 104
15 16 17 18 19 20 21 22 23 24 25
13 14 15 16 17 18 19 20 21 22
1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19 20
1 2 3 4 5 6 7 8 10 11 12 13 14 15 16 17
1 2 3 4 5 6 7 8 10 11 12 13 14 15 16 17
1 2 3 4 5 6 7 8 10 11 12 13 14 15 16 17
1 2 3 4 5 6 7 8 10 11 12 13 14 15 16 17
1 2 3 4 5 6 7 8 10 11 12 13 14 15 16 17
1 2 3 4 5 6 7 10 11 12 13 14 15 16 17
9 10 11 12 13 14 15 15
1 1 1 1
Name: Putative trehalose, ThuA like proteins, trehalose utilisation  Start Position: 25  End Position: 304
GNF Target Alias: PB1:SpeedET-SP13677A-pme-304-25-304  Sequence Type: SEGMENT  Residues: 280
DNA Length: 840  Molecular Weight: 31645.93  Isoelectric Point: 6.83
Epsilon 280: 57870  Gravy Index: -0.65  Species: Parabacteroides merdae
Activated: 1  Alanine Absolute: 14  Alanine Relative: 0.0500
Arginine Absolute: 16  Arginine Relative: 0.0571  Asparagine Absolute: 17
Asparagine Relative: 0.0607  Aspartic Acid Absolute: 18  Aspartic Acid Relative: 0.0643
Cysteine Absolute: 3  Cysteine Relative: 0.0107  Glutamic Acid Absolute: 17
Glutamic Acid Relative: 0.0607  Glutamine Absolute: 10  Glutamine Relative: 0.0357
Glycine Absolute: 29  Glycine Relative: 0.1036  Histidine Absolute: 9
Histidine Relative: 0.0321  Isoleucine Absolute: 10  Isoleucine Relative: 0.0357
Leucine Absolute: 20  Leucine Relative: 0.0714  Lysine Absolute: 18
Lysine Relative: 0.0643  Methionine Absolute: 4  Methionine Relative: 0.0143
Phenylalanine Absolute: 11  Phenylalanine Relative: 0.0393  Proline Absolute: 13
Proline Relative: 0.0464  Serine Absolute: 14  Serine Relative: 0.0500
Threonine Absolute: 15  Threonine Relative: 0.0536  Tryptophan Absolute: 7
Tryptophan Relative: 0.0250  Tyrosine Absolute: 13  Tyrosine Relative: 0.0464
Valine Absolute: 22  Valine Relative: 0.0786  Project: GNF Autogenerated
Selection Date: 2009-11-12  PFAM: submit  
ProposalRelationshipOwnerLab Name
87JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression

STAGE: Protein Purification

STAGE: Crystallization

STAGE: Crystal Hit

STAGE: SDC Receiving

STAGE: Screening

STAGE: Data Collection

STAGE: Integration

STAGE: Scaling

STAGE: Truncating

STAGE: Phasing

STAGE: Density Modification

STAGE: Tracing

STAGE: Refining

STAGE: QC

STAGE: Validation

STAGE: PDB Deposition
Contact Webmaster JCSG Menu