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TM0010;TM0010 |
Protein Sequence Comparative Analysis (PSCA) | |
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TM0010 TM0010 JCSG 281891 Crystal Hit 05-MAY-02 Protein Sequence Information 
TOPSAN
JCSG Internal annotations
SEQUENCE amino acids 607 aa >TM0010 TM0010 NADP-reducing hydrogenase, subunit C (hndC-1) MPLTTNTILICAGGACISAGEKSVKDAFEEELRKYGLDEVVRVIETGCMGACTLGPIAVI YPESVFYQKLTPDAAREIVEEHILKGRIVEKYLYKASEGKPVPRVHEEVPFFKKQVRIVT RNLGVIDPTKIEEYIARDGYFALAKALQMKPEDVIKEIKDSGLRGRGGAGFPTGLKWELA ARQKAEKKFVVCNADEGDPGAFMDRSVLEGDPHAVIEGMAIAAYAIGAQKGFVYVRAEYP LAIERLNIALNQAREYGFLGGNIMGTDFSFDIEIRIGAGAFVCGEETALMASIEGERGQP KVKPPYPVEKGLWGYPTVINNVETLANVPWIIRNGAKEFRKYGTENSPGTKVFALAGKVK NTGLVEVPMGITLRELIYEIGGGIAGDKKLKAIQTGGPSGGCIPAEYVDTPVDFESLQKL GAIMGSGGMIVMDEDDCMVDVARFFLEFTVEESCGKCTPCREGTKKMLEILEKITSGEGT EEDIEELEKLAHVVKDTSLCGLGQTAPNPVLSTLRYFRDEYLAHVKEKRCPSKKCKALIS YVIDPEKCVGCTACARVCPVQCISGQVRQPHVIDQAECVRCGSCIEVCRFGAISKVTPAL PVEEAVE CDS cDNA 1821 bp 1 gtgccgctca caacgaacac gatccttatc tgtgcaggtg gagcgtgtat ttccgccggc 60 61 gaaaagagtg tcaaagatgc cttcgaagaa gaattgagaa agtacggcct cgatgaagtt 120 121 gtcagggtga tagagaccgg ttgtatggga gcgtgtacat tgggaccgat tgccgtgatc 180 181 tacccggaaa gtgtgtttta ccagaaactc acaccagacg cagcaagaga gatcgtcgaa 240 241 gaacacattt tgaagggaag gatcgtggag aagtaccttt acaaggcttc cgaaggaaaa 300 301 cctgttccaa gagttcatga ggaagtgcct ttcttcaaga aacaggttag gatcgtcaca 360 361 aggaatctcg gtgtcataga tcccacgaag atagaggagt acatcgcaag agacggatat 420 421 tttgcccttg cgaaggctct tcagatgaaa ccggaagacg tgataaagga gataaaggac 480 481 agcggactca gaggaagagg aggagcgggt tttccaacag ggctcaagtg ggaactcgcg 540 541 gcaaggcaaa aggccgagaa gaaattcgtt gtctgtaacg cggacgaagg agacccgggt 600 601 gctttcatgg acagatcggt tcttgaagga gatccacacg ccgtcataga ggggatggca 660 661 atagccgcct acgcgatagg tgctcagaag gggttcgttt atgtcagggc ggagtatcct 720 721 ctcgccattg aaaggctcaa catagcgctg aatcaggcaa gagagtacgg tttccttgga 780 781 ggaaacataa tgggaacgga tttttccttc gatatagaga tcagaatcgg tgcgggtgcg 840 841 ttcgtttgtg gtgaggaaac cgctttgatg gcctccatag agggtgagag aggccaaccg 900 901 aaggtgaagc ctccctatcc cgttgagaag ggactctggg gataccccac agtgatcaac 960 961 aacgttgaaa cacttgcgaa cgtaccctgg atcatcagaa acggtgcgaa agagttcaga 1020 1021 aaatacggga cggagaactc tccgggaacg aaagtattcg ctctcgccgg taaagtgaag 1080 1081 aacacaggtc ttgtggaagt tcccatggga atcacactca gagagctcat atacgagatt 1140 1141 ggaggaggaa tagccggaga caaaaagctg aaagccatcc agactggggg accgagcgga 1200 1201 gggtgtatcc ccgctgagta cgtagacaca cctgttgatt tcgaatccct ccagaaactc 1260 1261 ggtgcaatca tgggttctgg tggaatgata gtgatggacg aagacgactg tatggttgac 1320 1321 gtcgcaaggt tcttcctcga gttcaccgtg gaagaatcct gtggaaaatg tacgccctgt 1380 1381 agagaaggaa cgaagaagat gctcgaaatc ctggagaaga tcacttccgg agagggaaca 1440 1441 gaggaggaca tagaagagct cgaaaagctg gcgcatgtgg taaaggacac ttccctctgt 1500 1501 ggacttggtc aaaccgcacc gaatcctgtt ctttccacac tcagatactt cagagacgag 1560 1561 tatctggcgc atgtcaaaga gaagaggtgt ccatccaaga agtgtaaagc gttgatcagc 1620 1621 tacgtgattg atcctgaaaa atgtgttgga tgtaccgcgt gtgcgagggt ctgtccggtt 1680 1681 cagtgtataa gcggtcaggt gagacagcct cacgtgatag atcaggcgga gtgtgtcagg 1740 1741 tgtggtagct gtatcgaagt ctgtagattt ggagctataa gcaaggttac tccagctctg 1800 1801 ccggtggagg aggcggtaga a 1821Warning: the change of start codon from ATG/M to GTG/V; Target constructs Download sequence in PIR or FASTA format Chemical properties of sequence with tag
Notes The start codon is a ATG/Methionine in most of sequences, but the GTG/V, TTG/L, CTG/I can be the start codons in some cases as expressing in E.coli. The start codon warning is labelled by RED color in sequence(sample: 10174951). Protein sequence information contains the annotation contents from both of JCSG and SWISS-PROT. The SWISS-PROT/TrEMBL annotation is accessed from SWALL(SPTR) on the EBI SRS server. PDB homologes show both identical and highly similar proteins with released date and protein function. |
